Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TSPAN9O75954 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN9O75954 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN9O75954 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TSPAN9O75954 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.09■■□□□ 1.13
TSPAN9O75954 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.08■■□□□ 1.13
TSPAN9O75954 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN9O75954 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN9O75954 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.07■■□□□ 1.12
TSPAN9O75954 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.07■■□□□ 1.12
TSPAN9O75954 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN9O75954 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TSPAN9O75954 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN9O75954 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.07■■□□□ 1.12
TSPAN9O75954 AL391121.1-201ENST00000607967 1349 ntBASIC22.06■■□□□ 1.12
TSPAN9O75954 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
TSPAN9O75954 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TSPAN9O75954 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN9O75954 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN9O75954 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN9O75954 RPS2P35-201ENST00000443417 897 ntBASIC22.05■■□□□ 1.12
TSPAN9O75954 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN9O75954 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN9O75954 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN9O75954 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN9O75954 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN9O75954 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN9O75954 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN9O75954 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN9O75954 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TSPAN9O75954 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN9O75954 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC22.01■■□□□ 1.11
TSPAN9O75954 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TSPAN9O75954 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.01■■□□□ 1.11
TSPAN9O75954 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.01■■□□□ 1.11
TSPAN9O75954 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN9O75954 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22■■□□□ 1.11
TSPAN9O75954 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TSPAN9O75954 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22■■□□□ 1.11
TSPAN9O75954 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
TSPAN9O75954 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.99■■□□□ 1.11
TSPAN9O75954 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN9O75954 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN9O75954 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TSPAN9O75954 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.99■■□□□ 1.11
TSPAN9O75954 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TSPAN9O75954 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.98■■□□□ 1.11
TSPAN9O75954 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN9O75954 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.97■■□□□ 1.11
TSPAN9O75954 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN9O75954 AP006261.1-201ENST00000584783 668 ntBASIC21.97■■□□□ 1.11
TSPAN9O75954 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN9O75954 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TSPAN9O75954 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.96■■□□□ 1.11
TSPAN9O75954 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TSPAN9O75954 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN9O75954 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN9O75954 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TSPAN9O75954 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TSPAN9O75954 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TSPAN9O75954 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.95■■□□□ 1.1
TSPAN9O75954 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.95■■□□□ 1.1
TSPAN9O75954 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TSPAN9O75954 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN9O75954 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN9O75954 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.94■■□□□ 1.1
TSPAN9O75954 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN9O75954 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TSPAN9O75954 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.94■■□□□ 1.1
TSPAN9O75954 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.93■■□□□ 1.1
TSPAN9O75954 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN9O75954 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.92■■□□□ 1.1
TSPAN9O75954 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TSPAN9O75954 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN9O75954 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN9O75954 AL162393.1-201ENST00000437852 946 ntBASIC21.9■■□□□ 1.1
TSPAN9O75954 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TSPAN9O75954 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TSPAN9O75954 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN9O75954 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN9O75954 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TSPAN9O75954 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN9O75954 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.89■■□□□ 1.09
TSPAN9O75954 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN9O75954 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN9O75954 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN9O75954 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN9O75954 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.87■■□□□ 1.09
TSPAN9O75954 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.86■■□□□ 1.09
TSPAN9O75954 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN9O75954 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.85■■□□□ 1.09
TSPAN9O75954 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN9O75954 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN9O75954 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN9O75954 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms