Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFB3O43676 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFB3O43676 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFB3O43676 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFB3O43676 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFB3O43676 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NDUFB3O43676 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.92■■□□□ 1.1
NDUFB3O43676 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
NDUFB3O43676 AC010864.1-201ENST00000609407 1511 ntBASIC21.9■■□□□ 1.1
NDUFB3O43676 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFB3O43676 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
NDUFB3O43676 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFB3O43676 AC108673.1-201ENST00000510422 1159 ntBASIC21.9■■□□□ 1.1
NDUFB3O43676 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFB3O43676 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDUFB3O43676 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NDUFB3O43676 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFB3O43676 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
NDUFB3O43676 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFB3O43676 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFB3O43676 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDUFB3O43676 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.86■■□□□ 1.09
NDUFB3O43676 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NDUFB3O43676 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.86■■□□□ 1.09
NDUFB3O43676 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NDUFB3O43676 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NDUFB3O43676 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFB3O43676 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFB3O43676 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFB3O43676 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.83■■□□□ 1.09
NDUFB3O43676 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NDUFB3O43676 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFB3O43676 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFB3O43676 ST7-AS1-201ENST00000456775 1889 ntBASIC21.81■■□□□ 1.08
NDUFB3O43676 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFB3O43676 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFB3O43676 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFB3O43676 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NDUFB3O43676 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.79■■□□□ 1.08
NDUFB3O43676 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.79■■□□□ 1.08
NDUFB3O43676 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFB3O43676 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.78■■□□□ 1.08
NDUFB3O43676 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NDUFB3O43676 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFB3O43676 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFB3O43676 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFB3O43676 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NDUFB3O43676 MIR6090-201ENST00000622481 60 ntBASIC21.78■■□□□ 1.08
NDUFB3O43676 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.78■■□□□ 1.08
NDUFB3O43676 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFB3O43676 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFB3O43676 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFB3O43676 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDUFB3O43676 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDUFB3O43676 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFB3O43676 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.74■■□□□ 1.07
NDUFB3O43676 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFB3O43676 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.73■■□□□ 1.07
NDUFB3O43676 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFB3O43676 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFB3O43676 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NDUFB3O43676 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFB3O43676 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.72■■□□□ 1.07
NDUFB3O43676 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.71■■□□□ 1.07
NDUFB3O43676 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFB3O43676 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NDUFB3O43676 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFB3O43676 ABCB10P1-201ENST00000614297 2181 ntBASIC21.7■■□□□ 1.06
NDUFB3O43676 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFB3O43676 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFB3O43676 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFB3O43676 DUX4L29-201ENST00000425409 679 ntBASIC21.68■■□□□ 1.06
NDUFB3O43676 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.68■■□□□ 1.06
NDUFB3O43676 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFB3O43676 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFB3O43676 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NDUFB3O43676 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.67■■□□□ 1.06
NDUFB3O43676 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NDUFB3O43676 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.67■■□□□ 1.06
NDUFB3O43676 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDUFB3O43676 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDUFB3O43676 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NDUFB3O43676 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NDUFB3O43676 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDUFB3O43676 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NDUFB3O43676 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.64■■□□□ 1.06
NDUFB3O43676 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
NDUFB3O43676 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.64■■□□□ 1.05
NDUFB3O43676 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.64■■□□□ 1.05
NDUFB3O43676 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.64■■□□□ 1.05
NDUFB3O43676 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
NDUFB3O43676 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NDUFB3O43676 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.63■■□□□ 1.05
NDUFB3O43676 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
NDUFB3O43676 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NDUFB3O43676 AC127502.1-201ENST00000399971 1502 ntBASIC21.62■■□□□ 1.05
NDUFB3O43676 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.62■■□□□ 1.05
NDUFB3O43676 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NDUFB3O43676 AC021231.2-201ENST00000594613 730 ntBASIC21.61■■□□□ 1.05
NDUFB3O43676 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms