Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
AP4M1O00189 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.27■■□□□ 1
AP4M1O00189 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
AP4M1O00189 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.27■■□□□ 1
AP4M1O00189 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
AP4M1O00189 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AP4M1O00189 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP4M1O00189 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AP4M1O00189 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AP4M1O00189 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.24■□□□□ 0.99
AP4M1O00189 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4M1O00189 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.24■□□□□ 0.99
AP4M1O00189 AP006261.1-201ENST00000584783 668 ntBASIC21.24■□□□□ 0.99
AP4M1O00189 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AP4M1O00189 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4M1O00189 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4M1O00189 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AP4M1O00189 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
AP4M1O00189 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AP4M1O00189 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4M1O00189 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4M1O00189 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.21■□□□□ 0.99
AP4M1O00189 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
AP4M1O00189 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP4M1O00189 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AP4M1O00189 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4M1O00189 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4M1O00189 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4M1O00189 MIR762-201ENST00000390236 83 ntBASIC21.2■□□□□ 0.98
AP4M1O00189 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4M1O00189 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4M1O00189 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4M1O00189 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4M1O00189 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4M1O00189 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.17■□□□□ 0.98
AP4M1O00189 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4M1O00189 MIR3665-201ENST00000578708 105 ntBASIC21.16■□□□□ 0.98
AP4M1O00189 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.16■□□□□ 0.98
AP4M1O00189 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4M1O00189 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4M1O00189 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
AP4M1O00189 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP4M1O00189 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4M1O00189 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4M1O00189 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
AP4M1O00189 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
AP4M1O00189 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4M1O00189 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
AP4M1O00189 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
AP4M1O00189 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4M1O00189 AC005559.1-201ENST00000589661 871 ntBASIC21.14■□□□□ 0.97
AP4M1O00189 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP4M1O00189 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP4M1O00189 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4M1O00189 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP4M1O00189 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
AP4M1O00189 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP4M1O00189 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
AP4M1O00189 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4M1O00189 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP4M1O00189 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP4M1O00189 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
AP4M1O00189 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4M1O00189 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
AP4M1O00189 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP4M1O00189 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP4M1O00189 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4M1O00189 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4M1O00189 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4M1O00189 AL162393.1-201ENST00000437852 946 ntBASIC21.1■□□□□ 0.97
AP4M1O00189 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.1■□□□□ 0.97
AP4M1O00189 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.1■□□□□ 0.97
AP4M1O00189 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP4M1O00189 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
AP4M1O00189 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AP4M1O00189 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.08■□□□□ 0.96
AP4M1O00189 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
AP4M1O00189 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP4M1O00189 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4M1O00189 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4M1O00189 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4M1O00189 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
AP4M1O00189 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.06■□□□□ 0.96
AP4M1O00189 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4M1O00189 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.06■□□□□ 0.96
AP4M1O00189 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.06■□□□□ 0.96
AP4M1O00189 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP4M1O00189 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4M1O00189 RPS2P35-201ENST00000443417 897 ntBASIC21.05■□□□□ 0.96
AP4M1O00189 DUX4L28-201ENST00000623687 678 ntBASIC21.05■□□□□ 0.96
AP4M1O00189 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4M1O00189 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4M1O00189 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4M1O00189 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.04■□□□□ 0.96
AP4M1O00189 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4M1O00189 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4M1O00189 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4M1O00189 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4M1O00189 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.03■□□□□ 0.96
AP4M1O00189 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms