Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
AP4M1O00189 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
AP4M1O00189 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
AP4M1O00189 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
AP4M1O00189 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
AP4M1O00189 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
AP4M1O00189 AL356512.1-201ENST00000607453 1739 ntBASIC26.19■■□□□ 1.78
AP4M1O00189 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
AP4M1O00189 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
AP4M1O00189 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.09■■□□□ 1.77
AP4M1O00189 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
AP4M1O00189 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
AP4M1O00189 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.74■■□□□ 1.71
AP4M1O00189 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.71■■□□□ 1.71
AP4M1O00189 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.64■■□□□ 1.7
AP4M1O00189 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
AP4M1O00189 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
AP4M1O00189 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.45■■□□□ 1.66
AP4M1O00189 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
AP4M1O00189 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
AP4M1O00189 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
AP4M1O00189 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.3■■□□□ 1.64
AP4M1O00189 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
AP4M1O00189 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
AP4M1O00189 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
AP4M1O00189 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
AP4M1O00189 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.06■■□□□ 1.6
AP4M1O00189 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
AP4M1O00189 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
AP4M1O00189 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.95■■□□□ 1.58
AP4M1O00189 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC24.91■■□□□ 1.58
AP4M1O00189 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
AP4M1O00189 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.74■■□□□ 1.55
AP4M1O00189 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
AP4M1O00189 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
AP4M1O00189 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
AP4M1O00189 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
AP4M1O00189 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
AP4M1O00189 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
AP4M1O00189 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
AP4M1O00189 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
AP4M1O00189 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
AP4M1O00189 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
AP4M1O00189 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
AP4M1O00189 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
AP4M1O00189 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
AP4M1O00189 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
AP4M1O00189 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
AP4M1O00189 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
AP4M1O00189 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
AP4M1O00189 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
AP4M1O00189 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.17■■□□□ 1.46
AP4M1O00189 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
AP4M1O00189 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
AP4M1O00189 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
AP4M1O00189 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.08■■□□□ 1.45
AP4M1O00189 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
AP4M1O00189 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
AP4M1O00189 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
AP4M1O00189 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.43
AP4M1O00189 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.01■■□□□ 1.43
AP4M1O00189 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24■■□□□ 1.43
AP4M1O00189 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
AP4M1O00189 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
AP4M1O00189 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
AP4M1O00189 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
AP4M1O00189 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
AP4M1O00189 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
AP4M1O00189 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
AP4M1O00189 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
AP4M1O00189 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.84■■□□□ 1.41
AP4M1O00189 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
AP4M1O00189 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
AP4M1O00189 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
AP4M1O00189 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
AP4M1O00189 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
AP4M1O00189 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.77■■□□□ 1.4
AP4M1O00189 AC015813.7-201ENST00000623294 581 ntBASIC23.75■■□□□ 1.39
AP4M1O00189 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
AP4M1O00189 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.75■■□□□ 1.39
AP4M1O00189 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.75■■□□□ 1.39
AP4M1O00189 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
AP4M1O00189 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
AP4M1O00189 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
AP4M1O00189 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
AP4M1O00189 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
AP4M1O00189 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.66■■□□□ 1.38
AP4M1O00189 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
AP4M1O00189 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
AP4M1O00189 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
AP4M1O00189 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
AP4M1O00189 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.6■■□□□ 1.37
AP4M1O00189 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.55■■□□□ 1.36
AP4M1O00189 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
AP4M1O00189 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
AP4M1O00189 AC006077.2-201ENST00000623591 457 ntBASIC23.52■■□□□ 1.36
AP4M1O00189 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.51■■□□□ 1.35
AP4M1O00189 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.5■■□□□ 1.35
AP4M1O00189 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
AP4M1O00189 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms