Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 AC010864.1-201ENST00000609407 1511 ntBASIC18.8■□□□□ 0.6
LYRM9A8MSI8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM9A8MSI8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.8■□□□□ 0.6
LYRM9A8MSI8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LYRM9A8MSI8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LYRM9A8MSI8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM9A8MSI8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM9A8MSI8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LYRM9A8MSI8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.77■□□□□ 0.6
LYRM9A8MSI8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYRM9A8MSI8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYRM9A8MSI8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYRM9A8MSI8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.74■□□□□ 0.59
LYRM9A8MSI8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.73■□□□□ 0.59
LYRM9A8MSI8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYRM9A8MSI8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYRM9A8MSI8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYRM9A8MSI8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.73■□□□□ 0.59
LYRM9A8MSI8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYRM9A8MSI8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYRM9A8MSI8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYRM9A8MSI8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.72■□□□□ 0.59
LYRM9A8MSI8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYRM9A8MSI8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYRM9A8MSI8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYRM9A8MSI8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYRM9A8MSI8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LYRM9A8MSI8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYRM9A8MSI8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYRM9A8MSI8 ST7-AS1-201ENST00000456775 1889 ntBASIC18.7■□□□□ 0.58
LYRM9A8MSI8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.7■□□□□ 0.58
LYRM9A8MSI8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYRM9A8MSI8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYRM9A8MSI8 MIR6090-201ENST00000622481 60 ntBASIC18.68■□□□□ 0.58
LYRM9A8MSI8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYRM9A8MSI8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYRM9A8MSI8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYRM9A8MSI8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYRM9A8MSI8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.66■□□□□ 0.58
LYRM9A8MSI8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LYRM9A8MSI8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYRM9A8MSI8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.65■□□□□ 0.58
LYRM9A8MSI8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LYRM9A8MSI8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYRM9A8MSI8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LYRM9A8MSI8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYRM9A8MSI8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.64■□□□□ 0.57
LYRM9A8MSI8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYRM9A8MSI8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LYRM9A8MSI8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.63■□□□□ 0.57
LYRM9A8MSI8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.62■□□□□ 0.57
LYRM9A8MSI8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYRM9A8MSI8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.62■□□□□ 0.57
LYRM9A8MSI8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYRM9A8MSI8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYRM9A8MSI8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYRM9A8MSI8 DUX4L29-201ENST00000425409 679 ntBASIC18.61■□□□□ 0.57
LYRM9A8MSI8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYRM9A8MSI8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYRM9A8MSI8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LYRM9A8MSI8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.6■□□□□ 0.57
LYRM9A8MSI8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.6■□□□□ 0.57
LYRM9A8MSI8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LYRM9A8MSI8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LYRM9A8MSI8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
LYRM9A8MSI8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LYRM9A8MSI8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.58■□□□□ 0.56
LYRM9A8MSI8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.58■□□□□ 0.56
LYRM9A8MSI8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYRM9A8MSI8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LYRM9A8MSI8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.57■□□□□ 0.56
LYRM9A8MSI8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.57■□□□□ 0.56
LYRM9A8MSI8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LYRM9A8MSI8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM9A8MSI8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LYRM9A8MSI8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM9A8MSI8 AC127502.1-201ENST00000399971 1502 ntBASIC18.55■□□□□ 0.56
LYRM9A8MSI8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM9A8MSI8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM9A8MSI8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LYRM9A8MSI8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LYRM9A8MSI8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM9A8MSI8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYRM9A8MSI8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms