Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 COPS7B-217ENST00000461350 3299 ntTSL 28.84□□□□□ -0.994e-6■■□□□ 14.5
PRPF8Q6P2Q9 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC8.8□□□□□ -11e-6■■□□□ 14.5
PRPF8Q6P2Q9 GALK2-205ENST00000558399 805 ntTSL 58.8□□□□□ -11e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTNNBL1-206ENST00000472237 582 ntTSL 28.79□□□□□ -11e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTNNBL1-208ENST00000481674 450 ntTSL 58.79□□□□□ -11e-6■■□□□ 14.5
PRPF8Q6P2Q9 AL139260.1-201ENST00000433671 630 ntTSL 3 BASIC8.71□□□□□ -1.011e-6■■□□□ 14.5
PRPF8Q6P2Q9 MRPL10-201ENST00000290208 2013 ntTSL 2 BASIC8.67□□□□□ -1.021e-6■■□□□ 14.5
PRPF8Q6P2Q9 EMC3-204ENST00000487465 1909 ntTSL 1 (best)8.66□□□□□ -1.023e-9■■□□□ 14.5
PRPF8Q6P2Q9 CCDC47-203ENST00000580986 552 ntTSL 48.6□□□□□ -1.031e-6■■□□□ 14.5
PRPF8Q6P2Q9 ERMP1-201ENST00000214893 4974 ntTSL 1 (best)8.58□□□□□ -1.042e-6■■□□□ 14.5
PRPF8Q6P2Q9 MCF2L-223ENST00000473345 399 ntTSL 38.44□□□□□ -1.061e-6■■□□□ 14.5
PRPF8Q6P2Q9 NCOA7-206ENST00000428318 548 ntTSL 38.3□□□□□ -1.081e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTAGE5-218ENST00000557148 554 ntTSL 58.24□□□□□ -1.091e-6■■□□□ 14.5
PRPF8Q6P2Q9 POP4-212ENST00000592749 590 ntTSL 58.11□□□□□ -1.111e-6■■□□□ 14.5
PRPF8Q6P2Q9 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC7.97□□□□□ -1.131e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTAGE5-212ENST00000555143 579 ntTSL 37.96□□□□□ -1.131e-6■■□□□ 14.5
PRPF8Q6P2Q9 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.151e-6■■□□□ 14.5
PRPF8Q6P2Q9 THOC2-207ENST00000438358 1137 ntTSL 57.75□□□□□ -1.174e-10■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-206ENST00000515137 1013 ntTSL 1 (best)7.72□□□□□ -1.171e-6■■□□□ 14.5
PRPF8Q6P2Q9 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.193e-9■■□□□ 14.5
PRPF8Q6P2Q9 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC7.62□□□□□ -1.191e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIF20A-203ENST00000503417 598 ntTSL 27.5□□□□□ -1.213e-7■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-210ENST00000548965 326 ntTSL 37.41□□□□□ -1.221e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC7.41□□□□□ -1.221e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.241e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-209ENST00000540927 590 ntTSL 47.23□□□□□ -1.251e-6■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.251e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALDH1A1-204ENST00000446946 805 ntTSL 57.2□□□□□ -1.269e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.281e-6■■□□□ 14.5
PRPF8Q6P2Q9 RNF10-217ENST00000542701 1388 ntTSL 57.03□□□□□ -1.281e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-205ENST00000536877 472 ntTSL 46.9□□□□□ -1.311e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.311e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALAD-204ENST00000452726 583 ntTSL 36.87□□□□□ -1.311e-6■■□□□ 14.5
PRPF8Q6P2Q9 RNF10-222ENST00000544805 536 ntTSL 26.77□□□□□ -1.331e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTNNA1-216ENST00000519489 358 ntTSL 26.75□□□□□ -1.331e-6■■□□□ 14.5
PRPF8Q6P2Q9 TIMM50-207ENST00000596239 683 ntTSL 26.75□□□□□ -1.331e-6■■□□□ 14.5
PRPF8Q6P2Q9 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.341e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC6.63□□□□□ -1.351e-6■■□□□ 14.5
PRPF8Q6P2Q9 LPIN1-215ENST00000475922 5432 ntTSL 26.56□□□□□ -1.361e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIF20A-207ENST00000513276 631 ntTSL 46.51□□□□□ -1.373e-7■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.49□□□□□ -1.371e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.391e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC6.37□□□□□ -1.391e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC6.3□□□□□ -1.41e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.421e-6■■□□□ 14.5
PRPF8Q6P2Q9 N4BP2L2-210ENST00000503814 5317 ntTSL 1 (best)6.18□□□□□ -1.421e-6■■□□□ 14.5
PRPF8Q6P2Q9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.421e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZDHHC20-205ENST00000464055 562 ntTSL 36.15□□□□□ -1.431e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-218ENST00000528877 546 ntTSL 46.07□□□□□ -1.441e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-208ENST00000548355 583 ntTSL 36.07□□□□□ -1.441e-6■■□□□ 14.5
PRPF8Q6P2Q9 NDUFAB1-204ENST00000567761 520 ntTSL 36.05□□□□□ -1.441e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC6.05□□□□□ -1.441e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALDH1A1-203ENST00000419959 806 ntTSL 55.94□□□□□ -1.469e-8■■□□□ 14.5
PRPF8Q6P2Q9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.88□□□□□ -1.471e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-217ENST00000542806 2385 ntTSL 25.81□□□□□ -1.481e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-204ENST00000548180 1747 ntTSL 25.76□□□□□ -1.491e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-207ENST00000438511 2303 ntTSL 25.69□□□□□ -1.51e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-213ENST00000539508 6574 ntTSL 55.68□□□□□ -1.51e-6■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.511e-6■■□□□ 14.5
PRPF8Q6P2Q9 RPF2-204ENST00000607388 3621 ntTSL 1 (best)5.64□□□□□ -1.511e-6■■□□□ 14.5
PRPF8Q6P2Q9 UCK2-207ENST00000475333 416 ntTSL 55.64□□□□□ -1.511e-12■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-213ENST00000550146 663 ntTSL 35.54□□□□□ -1.521e-6■■□□□ 14.5
PRPF8Q6P2Q9 RPF2-201ENST00000368864 873 ntTSL 55.52□□□□□ -1.531e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-211ENST00000549287 587 ntTSL 25.46□□□□□ -1.541e-6■■□□□ 14.5
PRPF8Q6P2Q9 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.541e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.42□□□□□ -1.541e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-209ENST00000472147 668 ntTSL 35.24□□□□□ -1.571e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC25A16-203ENST00000474927 311 ntTSL 55.17□□□□□ -1.581e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-204ENST00000506403 608 ntTSL 55.11□□□□□ -1.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-208ENST00000511440 548 ntTSL 45.11□□□□□ -1.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-205ENST00000515067 437 ntTSL 35.09□□□□□ -1.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.621e-6■■□□□ 14.5
PRPF8Q6P2Q9 ELF2-213ENST00000515489 510 ntTSL 24.91□□□□□ -1.621e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-203ENST00000414670 500 ntTSL 34.85□□□□□ -1.631e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-204ENST00000597691 576 ntTSL 24.83□□□□□ -1.641e-6■■□□□ 14.5
PRPF8Q6P2Q9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.661e-6■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.56□□□□□ -1.681e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.681e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-206ENST00000547682 491 ntTSL 34.54□□□□□ -1.681e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALDH1A1-206ENST00000493113 604 ntTSL 24.51□□□□□ -1.699e-8■■□□□ 14.5
PRPF8Q6P2Q9 PPP2CB-205ENST00000520056 755 ntTSL 54.44□□□□□ -1.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-211ENST00000552064 780 ntTSL 34.43□□□□□ -1.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-221ENST00000553217 660 ntTSL 34.28□□□□□ -1.721e-6■■□□□ 14.5
PRPF8Q6P2Q9 KIF21A-210ENST00000551264 3161 ntTSL 24.24□□□□□ -1.731e-6■■□□□ 14.5
PRPF8Q6P2Q9 PLOD2-207ENST00000478436 3835 ntTSL 1 (best)4.21□□□□□ -1.741e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.15□□□□□ -1.741e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.751e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-218ENST00000545857 3414 ntTSL 54.14□□□□□ -1.751e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-201ENST00000319198 3180 ntTSL 24.14□□□□□ -1.751e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALDH1A1-205ENST00000482210 879 ntTSL 24.12□□□□□ -1.759e-8■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.761e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.761e-6■■□□□ 14.5
PRPF8Q6P2Q9 MPDZ-203ENST00000381017 3032 ntTSL 23.96□□□□□ -1.781e-6■■□□□ 14.5
PRPF8Q6P2Q9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.781e-6■■□□□ 14.5
PRPF8Q6P2Q9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.792e-9■■□□□ 14.5
PRPF8Q6P2Q9 ZDHHC20-206ENST00000477811 579 ntTSL 33.73□□□□□ -1.811e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.821e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.821e-6■■□□□ 14.5
PRPF8Q6P2Q9 PPP2CB-202ENST00000518243 577 ntTSL 33.49□□□□□ -1.851e-6■■□□□ 14.5
Retrieved 100 of 73,762 protein–RNA pairs in 1701.7 ms