RNA–Protein interactions for RNA: ENST00000337109.8

MRPL35-202, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MRPL35, Length 3,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-202ENST00000337109 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.51
MRPL35-202ENST00000337109 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
MRPL35-202ENST00000337109 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
MRPL35-202ENST00000337109 DCAF1Q9Y4B6 1507 aa9.99□□□□□ -0.81
MRPL35-202ENST00000337109 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
MRPL35-202ENST00000337109 ABCC9O60706 1549 aa9.54□□□□□ -0.88
MRPL35-202ENST00000337109 NACADO15069 1562 aa9.48□□□□□ -0.89
MRPL35-202ENST00000337109 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
MRPL35-202ENST00000337109 UNC13AQ9UPW8 1703 aa9.35□□□□□ -0.91
MRPL35-202ENST00000337109 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
MRPL35-202ENST00000337109 RSF1Q96T23 1441 aaPredicted RBP9.29□□□□□ -0.92
MRPL35-202ENST00000337109 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
MRPL35-202ENST00000337109 EIF4G1Q04637 1599 aaKnown RBP9.26□□□□□ -0.93
MRPL35-202ENST00000337109 BAZ1AQ9NRL2 1556 aaPredicted RBP9.19□□□□□ -0.94
MRPL35-202ENST00000337109 CHIC1Q5VXU3 224 aa9.18□□□□□ -0.94
MRPL35-202ENST00000337109 MROH2BQ7Z745 1585 aa9.18□□□□□ -0.94
MRPL35-202ENST00000337109 SUPT5HO00267 1087 aaKnown RBP9.17□□□□□ -0.94
MRPL35-202ENST00000337109 BICRAQ9NZM4 1560 aa9.16□□□□□ -0.94
MRPL35-202ENST00000337109 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.94
MRPL35-202ENST00000337109 PEG3Q9GZU2 1588 aa9.14□□□□□ -0.95
MRPL35-202ENST00000337109 WIZO95785 1651 aa9.14□□□□□ -0.95
MRPL35-202ENST00000337109 SMARCA4P51532 1647 aa9.11□□□□□ -0.95
MRPL35-202ENST00000337109 DCAF8L2P0C7V8 631 aa9.07□□□□□ -0.96
MRPL35-202ENST00000337109 TOP2AP11388 1531 aaKnown RBP9.06□□□□□ -0.96
MRPL35-202ENST00000337109 SMARCA2P51531 1590 aa9.01□□□□□ -0.97
MRPL35-202ENST00000337109 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
MRPL35-202ENST00000337109 ATAD2BQ9ULI0 1458 aa8.82□□□□□ -1
MRPL35-202ENST00000337109 HMGXB3Q12766 1538 aa8.81□□□□□ -1
MRPL35-202ENST00000337109 PRDM2Q13029 1718 aa8.8□□□□□ -1
MRPL35-202ENST00000337109 ABCC8Q09428 1581 aa8.77□□□□□ -1.01
MRPL35-202ENST00000337109 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
MRPL35-202ENST00000337109 SYNJ1O43426 1573 aa8.74□□□□□ -1.01
MRPL35-202ENST00000337109 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
MRPL35-202ENST00000337109 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
MRPL35-202ENST00000337109 KIF21BO75037 1637 aa8.71□□□□□ -1.01
MRPL35-202ENST00000337109 TOP2BQ02880 1626 aa8.71□□□□□ -1.01
MRPL35-202ENST00000337109 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
MRPL35-202ENST00000337109 EEA1Q15075 1411 aa8.69□□□□□ -1.02
MRPL35-202ENST00000337109 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
MRPL35-202ENST00000337109 HRCP23327 699 aa8.67□□□□□ -1.02
MRPL35-202ENST00000337109 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
MRPL35-202ENST00000337109 SOGA1O94964 1423 aa8.63□□□□□ -1.03
MRPL35-202ENST00000337109 RUSC2Q8N2Y8 1516 aa8.63□□□□□ -1.03
MRPL35-202ENST00000337109 CFTRP13569 1480 aa8.62□□□□□ -1.03
MRPL35-202ENST00000337109 TNIKQ9UKE5 1360 aa8.6□□□□□ -1.03
MRPL35-202ENST00000337109 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
MRPL35-202ENST00000337109 ERICH3Q5RHP9 1530 aa8.58□□□□□ -1.04
MRPL35-202ENST00000337109 CUX1P39880 1505 aa8.57□□□□□ -1.04
MRPL35-202ENST00000337109 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
MRPL35-202ENST00000337109 GOLGA3Q08378 1498 aa8.54□□□□□ -1.04
MRPL35-202ENST00000337109 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
MRPL35-202ENST00000337109 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
MRPL35-202ENST00000337109 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
MRPL35-202ENST00000337109 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
MRPL35-202ENST00000337109 WDR97A6NE52 1622 aa8.51□□□□□ -1.05
MRPL35-202ENST00000337109 CC2D2AQ9P2K1 1620 aa8.51□□□□□ -1.05
MRPL35-202ENST00000337109 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
MRPL35-202ENST00000337109 CSRNP3Q8WYN3 585 aa8.46□□□□□ -1.06
MRPL35-202ENST00000337109 ARAP1Q96P48 1450 aa8.41□□□□□ -1.06
MRPL35-202ENST00000337109 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
MRPL35-202ENST00000337109 DNMBPQ6XZF7 1577 aa8.4□□□□□ -1.06
MRPL35-202ENST00000337109 VPS8Q8N3P4 1428 aa8.4□□□□□ -1.06
MRPL35-202ENST00000337109 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.07
MRPL35-202ENST00000337109 CLIP1P30622 1438 aa8.39□□□□□ -1.07
MRPL35-202ENST00000337109 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
MRPL35-202ENST00000337109 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
MRPL35-202ENST00000337109 ABCA5Q8WWZ7 1642 aa8.37□□□□□ -1.07
MRPL35-202ENST00000337109 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
MRPL35-202ENST00000337109 CUL7Q14999 1698 aa8.35□□□□□ -1.07
MRPL35-202ENST00000337109 CUX2O14529 1486 aa8.35□□□□□ -1.07
MRPL35-202ENST00000337109 CFAP43Q8NDM7 1665 aa8.34□□□□□ -1.07
MRPL35-202ENST00000337109 FGD5Q6ZNL6 1462 aa8.34□□□□□ -1.07
MRPL35-202ENST00000337109 CTTNBP2Q8WZ74 1663 aa8.34□□□□□ -1.07
MRPL35-202ENST00000337109 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
MRPL35-202ENST00000337109 ARHGAP35Q9NRY4 1499 aa8.33□□□□□ -1.08
MRPL35-202ENST00000337109 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
MRPL35-202ENST00000337109 IGF1RP08069 1367 aa8.33□□□□□ -1.08
MRPL35-202ENST00000337109 TOPBP1Q92547 1522 aa8.32□□□□□ -1.08
MRPL35-202ENST00000337109 TARBP1Q13395 1621 aaKnown RBP8.32□□□□□ -1.08
MRPL35-202ENST00000337109 FANCD2Q9BXW9 1451 aa8.32□□□□□ -1.08
MRPL35-202ENST00000337109 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
MRPL35-202ENST00000337109 KIF21AQ7Z4S6 1674 aa8.31□□□□□ -1.08
MRPL35-202ENST00000337109 LRRIQ1Q96JM4 1722 aa8.3□□□□□ -1.08
MRPL35-202ENST00000337109 POLA1P09884 1462 aaPredicted RBP8.3□□□□□ -1.08
MRPL35-202ENST00000337109 SAMD9Q5K651 1589 aa8.3□□□□□ -1.08
MRPL35-202ENST00000337109 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
MRPL35-202ENST00000337109 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
MRPL35-202ENST00000337109 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
MRPL35-202ENST00000337109 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
MRPL35-202ENST00000337109 EFCAB5A4FU69 1503 aa8.26□□□□□ -1.09
MRPL35-202ENST00000337109 NESP48681 1621 aa8.26□□□□□ -1.09
MRPL35-202ENST00000337109 PBRM1Q86U86 1689 aa8.24□□□□□ -1.09
MRPL35-202ENST00000337109 SNAPC4Q5SXM2 1469 aa8.22□□□□□ -1.09
MRPL35-202ENST00000337109 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
MRPL35-202ENST00000337109 THOC2Q8NI27 1593 aaKnown RBP8.21□□□□□ -1.1
MRPL35-202ENST00000337109 RAD54L2Q9Y4B4 1467 aa8.2□□□□□ -1.1
MRPL35-202ENST00000337109 ARHGEF11O15085 1522 aa8.2□□□□□ -1.1
MRPL35-202ENST00000337109 WDR62O43379 1518 aa8.19□□□□□ -1.1
MRPL35-202ENST00000337109 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
MRPL35-202ENST00000337109 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms