RNA–Protein interactions for RNA: ENST00000549288.5

TMEM106C-212, Transcript of transmembrane protein 106C, humanhuman

TSL 3 BASIC

Gene TMEM106C, Length 321 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-212ENST00000549288 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
TMEM106C-212ENST00000549288 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
TMEM106C-212ENST00000549288 ABCC9O60706 1549 aa18.44■□□□□ 0.54
TMEM106C-212ENST00000549288 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
TMEM106C-212ENST00000549288 NACADO15069 1562 aa17.7■□□□□ 0.42
TMEM106C-212ENST00000549288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
TMEM106C-212ENST00000549288 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
TMEM106C-212ENST00000549288 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
TMEM106C-212ENST00000549288 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
TMEM106C-212ENST00000549288 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
TMEM106C-212ENST00000549288 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
TMEM106C-212ENST00000549288 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
TMEM106C-212ENST00000549288 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
TMEM106C-212ENST00000549288 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
TMEM106C-212ENST00000549288 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
TMEM106C-212ENST00000549288 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
TMEM106C-212ENST00000549288 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
TMEM106C-212ENST00000549288 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
TMEM106C-212ENST00000549288 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
TMEM106C-212ENST00000549288 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
TMEM106C-212ENST00000549288 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
TMEM106C-212ENST00000549288 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
TMEM106C-212ENST00000549288 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
TMEM106C-212ENST00000549288 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
TMEM106C-212ENST00000549288 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
TMEM106C-212ENST00000549288 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
TMEM106C-212ENST00000549288 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
TMEM106C-212ENST00000549288 WIZO95785 1651 aa16.16■□□□□ 0.18
TMEM106C-212ENST00000549288 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
TMEM106C-212ENST00000549288 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
TMEM106C-212ENST00000549288 NESP48681 1621 aa15.95■□□□□ 0.14
TMEM106C-212ENST00000549288 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
TMEM106C-212ENST00000549288 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
TMEM106C-212ENST00000549288 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
TMEM106C-212ENST00000549288 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
TMEM106C-212ENST00000549288 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
TMEM106C-212ENST00000549288 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
TMEM106C-212ENST00000549288 CUX2O14529 1486 aa15.74■□□□□ 0.11
TMEM106C-212ENST00000549288 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
TMEM106C-212ENST00000549288 CFTRP13569 1480 aa15.71■□□□□ 0.1
TMEM106C-212ENST00000549288 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
TMEM106C-212ENST00000549288 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
TMEM106C-212ENST00000549288 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
TMEM106C-212ENST00000549288 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
TMEM106C-212ENST00000549288 WDR62O43379 1518 aa15.63■□□□□ 0.09
TMEM106C-212ENST00000549288 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
TMEM106C-212ENST00000549288 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
TMEM106C-212ENST00000549288 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
TMEM106C-212ENST00000549288 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
TMEM106C-212ENST00000549288 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
TMEM106C-212ENST00000549288 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
TMEM106C-212ENST00000549288 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
TMEM106C-212ENST00000549288 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
TMEM106C-212ENST00000549288 CUX1P39880 1505 aa15.29■□□□□ 0.04
TMEM106C-212ENST00000549288 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
TMEM106C-212ENST00000549288 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
TMEM106C-212ENST00000549288 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
TMEM106C-212ENST00000549288 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
TMEM106C-212ENST00000549288 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
TMEM106C-212ENST00000549288 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
TMEM106C-212ENST00000549288 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
TMEM106C-212ENST00000549288 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
TMEM106C-212ENST00000549288 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
TMEM106C-212ENST00000549288 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
TMEM106C-212ENST00000549288 CHD1O14646 1710 aa15.14■□□□□ 0.01
TMEM106C-212ENST00000549288 SOGA1O94964 1423 aa15.14■□□□□ 0.01
TMEM106C-212ENST00000549288 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
TMEM106C-212ENST00000549288 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.016e-6■■■■□ 25.1
TMEM106C-212ENST00000549288 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
TMEM106C-212ENST00000549288 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
TMEM106C-212ENST00000549288 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
TMEM106C-212ENST00000549288 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
TMEM106C-212ENST00000549288 GRIN2BQ13224 1484 aa15.02■□□□□ -0
TMEM106C-212ENST00000549288 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
TMEM106C-212ENST00000549288 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
TMEM106C-212ENST00000549288 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
TMEM106C-212ENST00000549288 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
TMEM106C-212ENST00000549288 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
TMEM106C-212ENST00000549288 FBLN2P98095 1184 aa14.92□□□□□ -0.02
TMEM106C-212ENST00000549288 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
TMEM106C-212ENST00000549288 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
TMEM106C-212ENST00000549288 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
TMEM106C-212ENST00000549288 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
TMEM106C-212ENST00000549288 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
TMEM106C-212ENST00000549288 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
TMEM106C-212ENST00000549288 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
TMEM106C-212ENST00000549288 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
TMEM106C-212ENST00000549288 CUL7Q14999 1698 aa14.84□□□□□ -0.03
TMEM106C-212ENST00000549288 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
TMEM106C-212ENST00000549288 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
TMEM106C-212ENST00000549288 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
TMEM106C-212ENST00000549288 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
TMEM106C-212ENST00000549288 NUP160Q12769 1436 aa14.76□□□□□ -0.05
TMEM106C-212ENST00000549288 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
TMEM106C-212ENST00000549288 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
TMEM106C-212ENST00000549288 SHROOM2Q13796 1616 aa14.74□□□□□ -0.05
TMEM106C-212ENST00000549288 IGF1RP08069 1367 aa14.69□□□□□ -0.06
TMEM106C-212ENST00000549288 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
TMEM106C-212ENST00000549288 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
TMEM106C-212ENST00000549288 CTTNBP2Q8WZ74 1663 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms