RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
COPS7B-217ENST00000461350 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
COPS7B-217ENST00000461350 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
COPS7B-217ENST00000461350 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.88
COPS7B-217ENST00000461350 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
COPS7B-217ENST00000461350 ABCC9O60706 1549 aa20.32■□□□□ 0.84
COPS7B-217ENST00000461350 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
COPS7B-217ENST00000461350 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.78
COPS7B-217ENST00000461350 NACADO15069 1562 aa19.85■□□□□ 0.77
COPS7B-217ENST00000461350 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
COPS7B-217ENST00000461350 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
COPS7B-217ENST00000461350 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
COPS7B-217ENST00000461350 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
COPS7B-217ENST00000461350 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
COPS7B-217ENST00000461350 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
COPS7B-217ENST00000461350 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
COPS7B-217ENST00000461350 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
COPS7B-217ENST00000461350 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.65
COPS7B-217ENST00000461350 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
COPS7B-217ENST00000461350 WIZO95785 1651 aa18.95■□□□□ 0.62
COPS7B-217ENST00000461350 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
COPS7B-217ENST00000461350 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
COPS7B-217ENST00000461350 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
COPS7B-217ENST00000461350 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
COPS7B-217ENST00000461350 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
COPS7B-217ENST00000461350 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
COPS7B-217ENST00000461350 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
COPS7B-217ENST00000461350 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
COPS7B-217ENST00000461350 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
COPS7B-217ENST00000461350 HRCP23327 699 aa18.37■□□□□ 0.53
COPS7B-217ENST00000461350 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
COPS7B-217ENST00000461350 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
COPS7B-217ENST00000461350 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
COPS7B-217ENST00000461350 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
COPS7B-217ENST00000461350 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
COPS7B-217ENST00000461350 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
COPS7B-217ENST00000461350 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
COPS7B-217ENST00000461350 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
COPS7B-217ENST00000461350 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
COPS7B-217ENST00000461350 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
COPS7B-217ENST00000461350 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
COPS7B-217ENST00000461350 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
COPS7B-217ENST00000461350 CFTRP13569 1480 aa17.99■□□□□ 0.47
COPS7B-217ENST00000461350 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
COPS7B-217ENST00000461350 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
COPS7B-217ENST00000461350 SOGA1O94964 1423 aa17.92■□□□□ 0.46
COPS7B-217ENST00000461350 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
COPS7B-217ENST00000461350 NESP48681 1621 aa17.87■□□□□ 0.45
COPS7B-217ENST00000461350 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
COPS7B-217ENST00000461350 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
COPS7B-217ENST00000461350 CUX1P39880 1505 aa17.82■□□□□ 0.44
COPS7B-217ENST00000461350 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
COPS7B-217ENST00000461350 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.43
COPS7B-217ENST00000461350 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
COPS7B-217ENST00000461350 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.42
COPS7B-217ENST00000461350 EEA1Q15075 1411 aa17.7■□□□□ 0.42
COPS7B-217ENST00000461350 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
COPS7B-217ENST00000461350 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
COPS7B-217ENST00000461350 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
COPS7B-217ENST00000461350 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
COPS7B-217ENST00000461350 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
COPS7B-217ENST00000461350 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
COPS7B-217ENST00000461350 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
COPS7B-217ENST00000461350 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
COPS7B-217ENST00000461350 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
COPS7B-217ENST00000461350 GOLGA3Q08378 1498 aa17.55■□□□□ 0.4
COPS7B-217ENST00000461350 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
COPS7B-217ENST00000461350 CUX2O14529 1486 aa17.54■□□□□ 0.4
COPS7B-217ENST00000461350 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
COPS7B-217ENST00000461350 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
COPS7B-217ENST00000461350 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
COPS7B-217ENST00000461350 KIF21BO75037 1637 aa17.51■□□□□ 0.39
COPS7B-217ENST00000461350 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
COPS7B-217ENST00000461350 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
COPS7B-217ENST00000461350 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-217ENST00000461350 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-217ENST00000461350 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
COPS7B-217ENST00000461350 IGF1RP08069 1367 aa17.42■□□□□ 0.38
COPS7B-217ENST00000461350 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
COPS7B-217ENST00000461350 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
COPS7B-217ENST00000461350 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
COPS7B-217ENST00000461350 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
COPS7B-217ENST00000461350 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
COPS7B-217ENST00000461350 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
COPS7B-217ENST00000461350 CLIP1P30622 1438 aa17.32■□□□□ 0.36
COPS7B-217ENST00000461350 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
COPS7B-217ENST00000461350 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
COPS7B-217ENST00000461350 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-217ENST00000461350 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
COPS7B-217ENST00000461350 WDR62O43379 1518 aa17.25■□□□□ 0.35
COPS7B-217ENST00000461350 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
COPS7B-217ENST00000461350 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 29.8
COPS7B-217ENST00000461350 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
COPS7B-217ENST00000461350 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
COPS7B-217ENST00000461350 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-217ENST00000461350 CUL7Q14999 1698 aa17.17■□□□□ 0.34
COPS7B-217ENST00000461350 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
COPS7B-217ENST00000461350 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
COPS7B-217ENST00000461350 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.34
COPS7B-217ENST00000461350 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms