RNA–Protein interactions for RNA: ENST00000478436.1

PLOD2-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 1 (best)

Gene PLOD2, Length 3,835 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-207ENST00000478436 NISCHQ9Y2I1 1504 aa13.44□□□□□ -0.26
PLOD2-207ENST00000478436 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
PLOD2-207ENST00000478436 ABCC9O60706 1549 aa11.53□□□□□ -0.56
PLOD2-207ENST00000478436 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
PLOD2-207ENST00000478436 UNC13AQ9UPW8 1703 aa11.47□□□□□ -0.57
PLOD2-207ENST00000478436 NACADO15069 1562 aa11.39□□□□□ -0.59
PLOD2-207ENST00000478436 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
PLOD2-207ENST00000478436 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
PLOD2-207ENST00000478436 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
PLOD2-207ENST00000478436 BICRAQ9NZM4 1560 aa11.23□□□□□ -0.61
PLOD2-207ENST00000478436 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
PLOD2-207ENST00000478436 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
PLOD2-207ENST00000478436 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
PLOD2-207ENST00000478436 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
PLOD2-207ENST00000478436 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
PLOD2-207ENST00000478436 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
PLOD2-207ENST00000478436 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
PLOD2-207ENST00000478436 HMGXB3Q12766 1538 aa10.52□□□□□ -0.73
PLOD2-207ENST00000478436 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
PLOD2-207ENST00000478436 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
PLOD2-207ENST00000478436 SMARCA2P51531 1590 aa10.46□□□□□ -0.73
PLOD2-207ENST00000478436 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
PLOD2-207ENST00000478436 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.74
PLOD2-207ENST00000478436 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
PLOD2-207ENST00000478436 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
PLOD2-207ENST00000478436 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
PLOD2-207ENST00000478436 MROH2BQ7Z745 1585 aa10.3□□□□□ -0.76
PLOD2-207ENST00000478436 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
PLOD2-207ENST00000478436 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
PLOD2-207ENST00000478436 WIZO95785 1651 aa10.24□□□□□ -0.77
PLOD2-207ENST00000478436 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
PLOD2-207ENST00000478436 CUX2O14529 1486 aa10.19□□□□□ -0.78
PLOD2-207ENST00000478436 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
PLOD2-207ENST00000478436 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
PLOD2-207ENST00000478436 WDR62O43379 1518 aa10.12□□□□□ -0.79
PLOD2-207ENST00000478436 NESP48681 1621 aa10.07□□□□□ -0.8
PLOD2-207ENST00000478436 RSF1Q96T23 1441 aaPredicted RBP10.06□□□□□ -0.8
PLOD2-207ENST00000478436 CFTRP13569 1480 aa10.03□□□□□ -0.8
PLOD2-207ENST00000478436 WDR97A6NE52 1622 aa9.97□□□□□ -0.81
PLOD2-207ENST00000478436 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
PLOD2-207ENST00000478436 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
PLOD2-207ENST00000478436 TARBP1Q13395 1621 aaKnown RBP9.9□□□□□ -0.82
PLOD2-207ENST00000478436 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.83
PLOD2-207ENST00000478436 PDS5BQ9NTI5 1447 aa9.89□□□□□ -0.83
PLOD2-207ENST00000478436 CCDC88BA6NC98 1476 aa9.88□□□□□ -0.83
PLOD2-207ENST00000478436 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
PLOD2-207ENST00000478436 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
PLOD2-207ENST00000478436 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
PLOD2-207ENST00000478436 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
PLOD2-207ENST00000478436 BIVM-ERCC5R4GMW8 1640 aa9.8□□□□□ -0.84
PLOD2-207ENST00000478436 EIF4G3O43432 1585 aaKnown RBP9.79□□□□□ -0.84
PLOD2-207ENST00000478436 TOPBP1Q92547 1522 aa9.77□□□□□ -0.85
PLOD2-207ENST00000478436 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
PLOD2-207ENST00000478436 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
PLOD2-207ENST00000478436 ABCA5Q8WWZ7 1642 aa9.75□□□□□ -0.85
PLOD2-207ENST00000478436 CHD1O14646 1710 aa9.73□□□□□ -0.85
PLOD2-207ENST00000478436 DNAJC5Q9H3Z4 198 aa9.72□□□□□ -0.85
PLOD2-207ENST00000478436 IFT140Q96RY7 1462 aa9.71□□□□□ -0.86
PLOD2-207ENST00000478436 CUX1P39880 1505 aa9.7□□□□□ -0.86
PLOD2-207ENST00000478436 CLASP1Q7Z460 1538 aa9.68□□□□□ -0.86
PLOD2-207ENST00000478436 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
PLOD2-207ENST00000478436 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
PLOD2-207ENST00000478436 ZNF608Q9ULD9 1512 aaPredicted RBP9.63□□□□□ -0.87
PLOD2-207ENST00000478436 SHROOM2Q13796 1616 aa9.63□□□□□ -0.87
PLOD2-207ENST00000478436 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
PLOD2-207ENST00000478436 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
PLOD2-207ENST00000478436 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
PLOD2-207ENST00000478436 SYNJ1O43426 1573 aa9.6□□□□□ -0.87
PLOD2-207ENST00000478436 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
PLOD2-207ENST00000478436 ADAMTS12P58397 1594 aa9.57□□□□□ -0.88
PLOD2-207ENST00000478436 FGD5Q6ZNL6 1462 aa9.57□□□□□ -0.88
PLOD2-207ENST00000478436 MAGI1Q96QZ7 1491 aaPredicted RBP9.54□□□□□ -0.88
PLOD2-207ENST00000478436 ERICH3Q5RHP9 1530 aa9.51□□□□□ -0.89
PLOD2-207ENST00000478436 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
PLOD2-207ENST00000478436 CEP170Q5SW79 1584 aa9.48□□□□□ -0.89
PLOD2-207ENST00000478436 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
PLOD2-207ENST00000478436 RUSC2Q8N2Y8 1516 aa9.47□□□□□ -0.89
PLOD2-207ENST00000478436 CUL7Q14999 1698 aa9.46□□□□□ -0.89
PLOD2-207ENST00000478436 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
PLOD2-207ENST00000478436 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
PLOD2-207ENST00000478436 SNAPC4Q5SXM2 1469 aa9.45□□□□□ -0.9
PLOD2-207ENST00000478436 NUP160Q12769 1436 aa9.44□□□□□ -0.9
PLOD2-207ENST00000478436 AQRO60306 1485 aaKnown RBP eCLIP9.43□□□□□ -0.9
PLOD2-207ENST00000478436 ARAP1Q96P48 1450 aa9.42□□□□□ -0.9
PLOD2-207ENST00000478436 SOGA1O94964 1423 aa9.42□□□□□ -0.9
PLOD2-207ENST00000478436 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.91
PLOD2-207ENST00000478436 GRIN2AQ12879 1464 aa9.38□□□□□ -0.91
PLOD2-207ENST00000478436 KIF13AQ9H1H9 1805 aa9.38□□□□□ -0.91
PLOD2-207ENST00000478436 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
PLOD2-207ENST00000478436 ERCC6L2Q5T890 1561 aa9.35□□□□□ -0.91
PLOD2-207ENST00000478436 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
PLOD2-207ENST00000478436 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
PLOD2-207ENST00000478436 ADCY10Q96PN6 1610 aa9.28□□□□□ -0.92
PLOD2-207ENST00000478436 OSCARQ8IYS5 282 aa9.28□□□□□ -0.92
PLOD2-207ENST00000478436 TDRD9Q8NDG6 1382 aaKnown RBP9.28□□□□□ -0.92
PLOD2-207ENST00000478436 PPRC1Q5VV67 1664 aaKnown RBP9.27□□□□□ -0.93
PLOD2-207ENST00000478436 MAPKBP1O60336 1514 aa9.26□□□□□ -0.93
PLOD2-207ENST00000478436 UGGT2Q9NYU1 1516 aa9.23□□□□□ -0.93
PLOD2-207ENST00000478436 SAMD9Q5K651 1589 aa9.21□□□□□ -0.94
PLOD2-207ENST00000478436 DIP2BQ9P265 1576 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms