RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
TMEM106C-213ENST00000550146 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
TMEM106C-213ENST00000550146 ABCC9O60706 1549 aa13.66□□□□□ -0.22
TMEM106C-213ENST00000550146 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
TMEM106C-213ENST00000550146 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
TMEM106C-213ENST00000550146 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
TMEM106C-213ENST00000550146 NACADO15069 1562 aa13.11□□□□□ -0.31
TMEM106C-213ENST00000550146 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
TMEM106C-213ENST00000550146 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
TMEM106C-213ENST00000550146 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
TMEM106C-213ENST00000550146 UNC13AQ9UPW8 1703 aa12.93□□□□□ -0.34
TMEM106C-213ENST00000550146 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
TMEM106C-213ENST00000550146 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMEM106C-213ENST00000550146 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
TMEM106C-213ENST00000550146 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
TMEM106C-213ENST00000550146 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
TMEM106C-213ENST00000550146 CHIC1Q5VXU3 224 aa12.59□□□□□ -0.39
TMEM106C-213ENST00000550146 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
TMEM106C-213ENST00000550146 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
TMEM106C-213ENST00000550146 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
TMEM106C-213ENST00000550146 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
TMEM106C-213ENST00000550146 BAZ1AQ9NRL2 1556 aaPredicted RBP12.1□□□□□ -0.47
TMEM106C-213ENST00000550146 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
TMEM106C-213ENST00000550146 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
TMEM106C-213ENST00000550146 SMARCA2P51531 1590 aa12.06□□□□□ -0.48
TMEM106C-213ENST00000550146 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
TMEM106C-213ENST00000550146 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
TMEM106C-213ENST00000550146 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
TMEM106C-213ENST00000550146 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
TMEM106C-213ENST00000550146 WIZO95785 1651 aa11.91□□□□□ -0.5
TMEM106C-213ENST00000550146 RSF1Q96T23 1441 aaPredicted RBP11.85□□□□□ -0.51
TMEM106C-213ENST00000550146 NESP48681 1621 aa11.82□□□□□ -0.52
TMEM106C-213ENST00000550146 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
TMEM106C-213ENST00000550146 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
TMEM106C-213ENST00000550146 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
TMEM106C-213ENST00000550146 KIF21AQ7Z4S6 1674 aa11.72□□□□□ -0.53
TMEM106C-213ENST00000550146 CUX2O14529 1486 aa11.72□□□□□ -0.53
TMEM106C-213ENST00000550146 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
TMEM106C-213ENST00000550146 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
TMEM106C-213ENST00000550146 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
TMEM106C-213ENST00000550146 CFTRP13569 1480 aa11.64□□□□□ -0.55
TMEM106C-213ENST00000550146 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
TMEM106C-213ENST00000550146 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
TMEM106C-213ENST00000550146 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
TMEM106C-213ENST00000550146 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
TMEM106C-213ENST00000550146 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
TMEM106C-213ENST00000550146 WDR62O43379 1518 aa11.57□□□□□ -0.56
TMEM106C-213ENST00000550146 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
TMEM106C-213ENST00000550146 SENP3Q9H4L4 574 aaPredicted RBP11.55□□□□□ -0.56
TMEM106C-213ENST00000550146 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
TMEM106C-213ENST00000550146 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
TMEM106C-213ENST00000550146 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
TMEM106C-213ENST00000550146 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
TMEM106C-213ENST00000550146 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
TMEM106C-213ENST00000550146 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
TMEM106C-213ENST00000550146 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
TMEM106C-213ENST00000550146 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
TMEM106C-213ENST00000550146 POLA1P09884 1462 aaPredicted RBP11.3□□□□□ -0.6
TMEM106C-213ENST00000550146 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
TMEM106C-213ENST00000550146 CUX1P39880 1505 aa11.28□□□□□ -0.6
TMEM106C-213ENST00000550146 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
TMEM106C-213ENST00000550146 SOGA1O94964 1423 aa11.26□□□□□ -0.61
TMEM106C-213ENST00000550146 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
TMEM106C-213ENST00000550146 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
TMEM106C-213ENST00000550146 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
TMEM106C-213ENST00000550146 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
TMEM106C-213ENST00000550146 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.616e-6■■■■□ 25.1
TMEM106C-213ENST00000550146 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
TMEM106C-213ENST00000550146 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
TMEM106C-213ENST00000550146 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
TMEM106C-213ENST00000550146 TOP2BQ02880 1626 aa11.18□□□□□ -0.62
TMEM106C-213ENST00000550146 CHD1O14646 1710 aa11.17□□□□□ -0.62
TMEM106C-213ENST00000550146 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
TMEM106C-213ENST00000550146 FBLN2P98095 1184 aa11.16□□□□□ -0.62
TMEM106C-213ENST00000550146 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
TMEM106C-213ENST00000550146 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
TMEM106C-213ENST00000550146 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
TMEM106C-213ENST00000550146 GRIN2BQ13224 1484 aa11.12□□□□□ -0.63
TMEM106C-213ENST00000550146 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
TMEM106C-213ENST00000550146 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
TMEM106C-213ENST00000550146 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
TMEM106C-213ENST00000550146 CHMP7Q8WUX9 453 aaPredicted RBP11.1□□□□□ -0.63
TMEM106C-213ENST00000550146 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
TMEM106C-213ENST00000550146 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
TMEM106C-213ENST00000550146 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
TMEM106C-213ENST00000550146 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
TMEM106C-213ENST00000550146 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
TMEM106C-213ENST00000550146 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
TMEM106C-213ENST00000550146 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
TMEM106C-213ENST00000550146 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
TMEM106C-213ENST00000550146 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
TMEM106C-213ENST00000550146 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
TMEM106C-213ENST00000550146 GRIN2AQ12879 1464 aa10.98□□□□□ -0.65
TMEM106C-213ENST00000550146 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
TMEM106C-213ENST00000550146 NUP160Q12769 1436 aa10.95□□□□□ -0.66
TMEM106C-213ENST00000550146 CEP170Q5SW79 1584 aa10.94□□□□□ -0.66
TMEM106C-213ENST00000550146 ARAP1Q96P48 1450 aa10.94□□□□□ -0.66
TMEM106C-213ENST00000550146 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
TMEM106C-213ENST00000550146 IGF1RP08069 1367 aa10.91□□□□□ -0.66
TMEM106C-213ENST00000550146 CUL7Q14999 1698 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 422.1 ms