RNA–Protein interactions for RNA: ENST00000542282.5

ANKLE2-208, Transcript of ankyrin repeat and LEM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene ANKLE2, Length 3,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKLE2-208ENST00000542282 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
ANKLE2-208ENST00000542282 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
ANKLE2-208ENST00000542282 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
ANKLE2-208ENST00000542282 ABCC9O60706 1549 aa20.51■□□□□ 0.87
ANKLE2-208ENST00000542282 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
ANKLE2-208ENST00000542282 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
ANKLE2-208ENST00000542282 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.85
ANKLE2-208ENST00000542282 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
ANKLE2-208ENST00000542282 HRCP23327 699 aa20.16■□□□□ 0.82
ANKLE2-208ENST00000542282 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
ANKLE2-208ENST00000542282 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
ANKLE2-208ENST00000542282 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
ANKLE2-208ENST00000542282 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
ANKLE2-208ENST00000542282 LOC105371045A0A1W2PR82 267 aa19.63■□□□□ 0.73
ANKLE2-208ENST00000542282 NACADO15069 1562 aa19.59■□□□□ 0.73
ANKLE2-208ENST00000542282 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
ANKLE2-208ENST00000542282 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
ANKLE2-208ENST00000542282 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
ANKLE2-208ENST00000542282 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
ANKLE2-208ENST00000542282 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
ANKLE2-208ENST00000542282 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
ANKLE2-208ENST00000542282 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
ANKLE2-208ENST00000542282 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
ANKLE2-208ENST00000542282 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
ANKLE2-208ENST00000542282 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
ANKLE2-208ENST00000542282 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
ANKLE2-208ENST00000542282 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
ANKLE2-208ENST00000542282 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
ANKLE2-208ENST00000542282 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
ANKLE2-208ENST00000542282 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
ANKLE2-208ENST00000542282 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
ANKLE2-208ENST00000542282 WIZO95785 1651 aa18.61■□□□□ 0.57
ANKLE2-208ENST00000542282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
ANKLE2-208ENST00000542282 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
ANKLE2-208ENST00000542282 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
ANKLE2-208ENST00000542282 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
ANKLE2-208ENST00000542282 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
ANKLE2-208ENST00000542282 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
ANKLE2-208ENST00000542282 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
ANKLE2-208ENST00000542282 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
ANKLE2-208ENST00000542282 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
ANKLE2-208ENST00000542282 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
ANKLE2-208ENST00000542282 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
ANKLE2-208ENST00000542282 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
ANKLE2-208ENST00000542282 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
ANKLE2-208ENST00000542282 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
ANKLE2-208ENST00000542282 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
ANKLE2-208ENST00000542282 CEP162Q5TB80 1403 aa18.24■□□□□ 0.51
ANKLE2-208ENST00000542282 SOGA1O94964 1423 aa18.21■□□□□ 0.51
ANKLE2-208ENST00000542282 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
ANKLE2-208ENST00000542282 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
ANKLE2-208ENST00000542282 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
ANKLE2-208ENST00000542282 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
ANKLE2-208ENST00000542282 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
ANKLE2-208ENST00000542282 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
ANKLE2-208ENST00000542282 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
ANKLE2-208ENST00000542282 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
ANKLE2-208ENST00000542282 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
ANKLE2-208ENST00000542282 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
ANKLE2-208ENST00000542282 MIER1Q8N108 512 aa17.99■□□□□ 0.47
ANKLE2-208ENST00000542282 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
ANKLE2-208ENST00000542282 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
ANKLE2-208ENST00000542282 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
ANKLE2-208ENST00000542282 MYT1Q01538 1121 aa17.96■□□□□ 0.47
ANKLE2-208ENST00000542282 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
ANKLE2-208ENST00000542282 EEA1Q15075 1411 aa17.92■□□□□ 0.46
ANKLE2-208ENST00000542282 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
ANKLE2-208ENST00000542282 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
ANKLE2-208ENST00000542282 KIF21BO75037 1637 aa17.82■□□□□ 0.44
ANKLE2-208ENST00000542282 NESP48681 1621 aa17.81■□□□□ 0.44
ANKLE2-208ENST00000542282 CLIP1P30622 1438 aa17.79■□□□□ 0.44
ANKLE2-208ENST00000542282 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
ANKLE2-208ENST00000542282 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
ANKLE2-208ENST00000542282 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
ANKLE2-208ENST00000542282 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
ANKLE2-208ENST00000542282 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
ANKLE2-208ENST00000542282 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
ANKLE2-208ENST00000542282 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
ANKLE2-208ENST00000542282 CFTRP13569 1480 aa17.61■□□□□ 0.41
ANKLE2-208ENST00000542282 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.4
ANKLE2-208ENST00000542282 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
ANKLE2-208ENST00000542282 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
ANKLE2-208ENST00000542282 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
ANKLE2-208ENST00000542282 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
ANKLE2-208ENST00000542282 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
ANKLE2-208ENST00000542282 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
ANKLE2-208ENST00000542282 APLP2Q06481 763 aa17.5■□□□□ 0.39
ANKLE2-208ENST00000542282 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
ANKLE2-208ENST00000542282 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
ANKLE2-208ENST00000542282 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
ANKLE2-208ENST00000542282 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
ANKLE2-208ENST00000542282 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
ANKLE2-208ENST00000542282 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
ANKLE2-208ENST00000542282 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
ANKLE2-208ENST00000542282 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
ANKLE2-208ENST00000542282 CUX2O14529 1486 aa17.39■□□□□ 0.37
ANKLE2-208ENST00000542282 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
ANKLE2-208ENST00000542282 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
ANKLE2-208ENST00000542282 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
ANKLE2-208ENST00000542282 CUX1P39880 1505 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms