RNA–Protein interactions for RNA: ENST00000409180.1

MRPL35-203, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene MRPL35, Length 651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-203ENST00000409180 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
MRPL35-203ENST00000409180 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
MRPL35-203ENST00000409180 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
MRPL35-203ENST00000409180 ABCC9O60706 1549 aa16.57■□□□□ 0.24
MRPL35-203ENST00000409180 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
MRPL35-203ENST00000409180 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
MRPL35-203ENST00000409180 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
MRPL35-203ENST00000409180 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
MRPL35-203ENST00000409180 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
MRPL35-203ENST00000409180 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
MRPL35-203ENST00000409180 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
MRPL35-203ENST00000409180 NACADO15069 1562 aa15.24■□□□□ 0.03
MRPL35-203ENST00000409180 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
MRPL35-203ENST00000409180 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
MRPL35-203ENST00000409180 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
MRPL35-203ENST00000409180 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
MRPL35-203ENST00000409180 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
MRPL35-203ENST00000409180 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
MRPL35-203ENST00000409180 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
MRPL35-203ENST00000409180 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
MRPL35-203ENST00000409180 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
MRPL35-203ENST00000409180 FOXD1Q16676 465 aa14.59□□□□□ -0.07
MRPL35-203ENST00000409180 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
MRPL35-203ENST00000409180 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
MRPL35-203ENST00000409180 CUX2O14529 1486 aa14.4□□□□□ -0.1
MRPL35-203ENST00000409180 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
MRPL35-203ENST00000409180 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
MRPL35-203ENST00000409180 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
MRPL35-203ENST00000409180 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
MRPL35-203ENST00000409180 NESP48681 1621 aa14.1□□□□□ -0.15
MRPL35-203ENST00000409180 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
MRPL35-203ENST00000409180 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
MRPL35-203ENST00000409180 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
MRPL35-203ENST00000409180 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
MRPL35-203ENST00000409180 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
MRPL35-203ENST00000409180 SMARCA4P51532 1647 aa13.83□□□□□ -0.2
MRPL35-203ENST00000409180 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
MRPL35-203ENST00000409180 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
MRPL35-203ENST00000409180 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
MRPL35-203ENST00000409180 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
MRPL35-203ENST00000409180 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
MRPL35-203ENST00000409180 ADRA2BP18089 450 aa13.74□□□□□ -0.21
MRPL35-203ENST00000409180 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
MRPL35-203ENST00000409180 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
MRPL35-203ENST00000409180 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.22
MRPL35-203ENST00000409180 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
MRPL35-203ENST00000409180 WDR62O43379 1518 aa13.68□□□□□ -0.22
MRPL35-203ENST00000409180 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
MRPL35-203ENST00000409180 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
MRPL35-203ENST00000409180 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
MRPL35-203ENST00000409180 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
MRPL35-203ENST00000409180 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
MRPL35-203ENST00000409180 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
MRPL35-203ENST00000409180 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
MRPL35-203ENST00000409180 MSH5O43196 834 aa13.51□□□□□ -0.25
MRPL35-203ENST00000409180 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
MRPL35-203ENST00000409180 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
MRPL35-203ENST00000409180 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
MRPL35-203ENST00000409180 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
MRPL35-203ENST00000409180 CFTRP13569 1480 aa13.42□□□□□ -0.26
MRPL35-203ENST00000409180 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
MRPL35-203ENST00000409180 WIZO95785 1651 aa13.38□□□□□ -0.27
MRPL35-203ENST00000409180 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
MRPL35-203ENST00000409180 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
MRPL35-203ENST00000409180 FBLN2P98095 1184 aa13.28□□□□□ -0.28
MRPL35-203ENST00000409180 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
MRPL35-203ENST00000409180 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
MRPL35-203ENST00000409180 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
MRPL35-203ENST00000409180 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
MRPL35-203ENST00000409180 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
MRPL35-203ENST00000409180 CHD1O14646 1710 aa13.13□□□□□ -0.31
MRPL35-203ENST00000409180 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
MRPL35-203ENST00000409180 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
MRPL35-203ENST00000409180 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
MRPL35-203ENST00000409180 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
MRPL35-203ENST00000409180 TARBP1Q13395 1621 aaKnown RBP13.08□□□□□ -0.32
MRPL35-203ENST00000409180 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
MRPL35-203ENST00000409180 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
MRPL35-203ENST00000409180 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
MRPL35-203ENST00000409180 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
MRPL35-203ENST00000409180 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
MRPL35-203ENST00000409180 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
MRPL35-203ENST00000409180 SOGA1O94964 1423 aa13.02□□□□□ -0.33
MRPL35-203ENST00000409180 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
MRPL35-203ENST00000409180 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
MRPL35-203ENST00000409180 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
MRPL35-203ENST00000409180 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
MRPL35-203ENST00000409180 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
MRPL35-203ENST00000409180 GRIN2BQ13224 1484 aa12.93□□□□□ -0.34
MRPL35-203ENST00000409180 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
MRPL35-203ENST00000409180 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
MRPL35-203ENST00000409180 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
MRPL35-203ENST00000409180 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
MRPL35-203ENST00000409180 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
MRPL35-203ENST00000409180 CUX1P39880 1505 aa12.83□□□□□ -0.36
MRPL35-203ENST00000409180 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
MRPL35-203ENST00000409180 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
MRPL35-203ENST00000409180 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
MRPL35-203ENST00000409180 NUP160Q12769 1436 aa12.74□□□□□ -0.37
MRPL35-203ENST00000409180 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms