RNA–Protein interactions for RNA: ENST00000475922.1

LPIN1-215, Transcript of lipin 1, human

TSL 2

Gene LPIN1, Length 5,432 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPIN1-215	ENST00000475922	NISCH	Q9Y2I1	1504 aa		14.72	□□□□□ -0.05
LPIN1-215	ENST00000475922	DCAF8L2	P0C7V8	631 aa		14.45	□□□□□ -0.1
LPIN1-215	ENST00000475922	SUPT5H	O00267	1087 aa	Known RBP	13.27	□□□□□ -0.29
LPIN1-215	ENST00000475922	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.16	□□□□□ -0.3
LPIN1-215	ENST00000475922	SHROOM4	Q9ULL8	1493 aa		13.03	□□□□□ -0.32
LPIN1-215	ENST00000475922	APLP2	Q06481	763 aa		12.94	□□□□□ -0.34
LPIN1-215	ENST00000475922	EHMT2	Q96KQ7	1210 aa		12.85	□□□□□ -0.35
LPIN1-215	ENST00000475922	ABCC9	O60706	1549 aa		12.65	□□□□□ -0.38
LPIN1-215	ENST00000475922	CCDC180	Q9P1Z9	1646 aa		12.61	□□□□□ -0.39
LPIN1-215	ENST00000475922	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.53	□□□□□ -0.4
LPIN1-215	ENST00000475922	PELP1	Q8IZL8	1130 aa	Known RBP	12.51	□□□□□ -0.41
LPIN1-215	ENST00000475922	RANGAP1	P46060	587 aa	Predicted RBP	12.48	□□□□□ -0.41
LPIN1-215	ENST00000475922	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.38	□□□□□ -0.43
LPIN1-215	ENST00000475922	TRIM41	Q8WV44	630 aa		12.38	□□□□□ -0.43
LPIN1-215	ENST00000475922	UBTF	P17480	764 aa	Known RBP	12.34	□□□□□ -0.43
LPIN1-215	ENST00000475922	MYT1L	Q9UL68	1186 aa		12.31	□□□□□ -0.44
LPIN1-215	ENST00000475922	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.22	□□□□□ -0.45
LPIN1-215	ENST00000475922	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.22	□□□□□ -0.45
LPIN1-215	ENST00000475922	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.21	□□□□□ -0.45
LPIN1-215	ENST00000475922	RB1CC1	Q8TDY2	1594 aa		12.19	□□□□□ -0.46
LPIN1-215	ENST00000475922	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
LPIN1-215	ENST00000475922	PCGF6	Q9BYE7	350 aa		12.14	□□□□□ -0.47
LPIN1-215	ENST00000475922	NACAD	O15069	1562 aa		12.14	□□□□□ -0.47
LPIN1-215	ENST00000475922	CCER1	Q8TC90	406 aa	Predicted RBP	12.06	□□□□□ -0.48
LPIN1-215	ENST00000475922	SCRIB	Q14160	1630 aa		12	□□□□□ -0.49
LPIN1-215	ENST00000475922	ZEB1	P37275	1124 aa	Predicted RBP	11.99	□□□□□ -0.49
LPIN1-215	ENST00000475922	DCAF1	Q9Y4B6	1507 aa		11.99	□□□□□ -0.49
LPIN1-215	ENST00000475922	CHIC1	Q5VXU3	224 aa		11.93	□□□□□ -0.5
LPIN1-215	ENST00000475922	CENPB	P07199	599 aa	Predicted RBP	11.89	□□□□□ -0.51
LPIN1-215	ENST00000475922	ERICH6	Q7L0X2	663 aa		11.89	□□□□□ -0.51
LPIN1-215	ENST00000475922	NEFL	P07196	543 aa		11.86	□□□□□ -0.51
LPIN1-215	ENST00000475922	ITGAE	P38570	1179 aa		11.86	□□□□□ -0.51
LPIN1-215	ENST00000475922	MYO15B	Q96JP2	1530 aa		11.85	□□□□□ -0.51
LPIN1-215	ENST00000475922	POLR3GL	Q9BT43	218 aa		11.84	□□□□□ -0.51
LPIN1-215	ENST00000475922	FBLN2	P98095	1184 aa		11.82	□□□□□ -0.52
LPIN1-215	ENST00000475922	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.81	□□□□□ -0.52
LPIN1-215	ENST00000475922	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.74	□□□□□ -0.53
LPIN1-215	ENST00000475922	ESF1	Q9H501	851 aa	Known RBP	11.64	□□□□□ -0.55
LPIN1-215	ENST00000475922	FAM50A	Q14320	339 aa	Known RBP	11.63	□□□□□ -0.55
LPIN1-215	ENST00000475922	BCAN	Q96GW7	911 aa		11.63	□□□□□ -0.55
LPIN1-215	ENST00000475922	TRIM52	Q96A61	297 aa		11.62	□□□□□ -0.55
LPIN1-215	ENST00000475922	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.62	□□□□□ -0.55
LPIN1-215	ENST00000475922	NPM1	P06748	294 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
LPIN1-215	ENST00000475922	DAXX	Q9UER7	740 aa	Predicted RBP	11.59	□□□□□ -0.55
LPIN1-215	ENST00000475922	CNGB1	Q14028	1251 aa	Predicted RBP	11.59	□□□□□ -0.55
LPIN1-215	ENST00000475922	YTHDC1	Q96MU7	727 aa	Known RBP	11.58	□□□□□ -0.56
LPIN1-215	ENST00000475922	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.58	□□□□□ -0.56
LPIN1-215	ENST00000475922	TRIM26	Q12899	539 aa	Predicted RBP	11.58	□□□□□ -0.56
LPIN1-215	ENST00000475922	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.52	□□□□□ -0.57
LPIN1-215	ENST00000475922	RSF1	Q96T23	1441 aa	Predicted RBP	11.49	□□□□□ -0.57
LPIN1-215	ENST00000475922	SMARCA2	P51531	1590 aa		11.48	□□□□□ -0.57
LPIN1-215	ENST00000475922	NEFM	P07197	916 aa		11.45	□□□□□ -0.58
LPIN1-215	ENST00000475922	ZNF326	Q5BKZ1	582 aa	Known RBP	11.45	□□□□□ -0.58
LPIN1-215	ENST00000475922	LOC105371045	A0A1W2PR82	267 aa		11.44	□□□□□ -0.58
LPIN1-215	ENST00000475922	STAG3	Q9UJ98	1225 aa		11.44	□□□□□ -0.58
LPIN1-215	ENST00000475922	SLC24A1	O60721	1099 aa		11.44	□□□□□ -0.58
LPIN1-215	ENST00000475922	ARID3C	A6NKF2	412 aa		11.42	□□□□□ -0.58
LPIN1-215	ENST00000475922	CLSPN	Q9HAW4	1339 aa		11.42	□□□□□ -0.58
LPIN1-215	ENST00000475922	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.42	□□□□□ -0.58
LPIN1-215	ENST00000475922	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.41	□□□□□ -0.58
LPIN1-215	ENST00000475922	PLPPR3	Q6T4P5	718 aa		11.4	□□□□□ -0.58
LPIN1-215	ENST00000475922	ERCC6	Q03468	1493 aa		11.4	□□□□□ -0.59
LPIN1-215	ENST00000475922	CSRNP3	Q8WYN3	585 aa		11.39	□□□□□ -0.59
LPIN1-215	ENST00000475922	P3H3	Q8IVL6	736 aa		11.38	□□□□□ -0.59
LPIN1-215	ENST00000475922	NEUROD1	Q13562	356 aa		11.37	□□□□□ -0.59
LPIN1-215	ENST00000475922	CECR2	Q9BXF3	1484 aa		11.35	□□□□□ -0.59
LPIN1-215	ENST00000475922	PDS5B	Q9NTI5	1447 aa		11.33	□□□□□ -0.6
LPIN1-215	ENST00000475922	CHGA	P10645	457 aa	Known RBP	11.32	□□□□□ -0.6
LPIN1-215	ENST00000475922	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.3	□□□□□ -0.6
LPIN1-215	ENST00000475922	EEA1	Q15075	1411 aa		11.3	□□□□□ -0.6
LPIN1-215	ENST00000475922	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.27	□□□□□ -0.61
LPIN1-215	ENST00000475922	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.26	□□□□□ -0.61
LPIN1-215	ENST00000475922	MROH2B	Q7Z745	1585 aa		11.26	□□□□□ -0.61
LPIN1-215	ENST00000475922	HRC	P23327	699 aa		11.25	□□□□□ -0.61
LPIN1-215	ENST00000475922	ATAD2B	Q9ULI0	1458 aa		11.24	□□□□□ -0.61
LPIN1-215	ENST00000475922	CANX	P27824	592 aa	Known RBP	11.24	□□□□□ -0.61
LPIN1-215	ENST00000475922	TOP2A	P11388	1531 aa	Known RBP	11.22	□□□□□ -0.61
LPIN1-215	ENST00000475922	SMARCA4	P51532	1647 aa		11.22	□□□□□ -0.61
LPIN1-215	ENST00000475922	KIF27	Q86VH2	1401 aa		11.21	□□□□□ -0.61
LPIN1-215	ENST00000475922	ANP32C	O43423	234 aa		11.21	□□□□□ -0.62
LPIN1-215	ENST00000475922	CADPS	Q9ULU8	1353 aa		11.19	□□□□□ -0.62
LPIN1-215	ENST00000475922	TSPY4	P0CV99	314 aa		11.18	□□□□□ -0.62
LPIN1-215	ENST00000475922	TSPY10	P0CW01	314 aa		11.18	□□□□□ -0.62
LPIN1-215	ENST00000475922	SCAF1	Q9H7N4	1312 aa	Known RBP	11.17	□□□□□ -0.62
LPIN1-215	ENST00000475922	NCAPD3	P42695	1498 aa		11.15	□□□□□ -0.62
LPIN1-215	ENST00000475922	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LPIN1-215	ENST00000475922	CCDC88B	A6NC98	1476 aa		11.14	□□□□□ -0.63
LPIN1-215	ENST00000475922	EIF4G1	Q04637	1599 aa	Known RBP	11.14	□□□□□ -0.63
LPIN1-215	ENST00000475922	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.13	□□□□□ -0.63
LPIN1-215	ENST00000475922	BCL11A	Q9H165	835 aa		11.13	□□□□□ -0.63
LPIN1-215	ENST00000475922	ABCC8	Q09428	1581 aa		11.13	□□□□□ -0.63
LPIN1-215	ENST00000475922	C14orf37	Q86TY3	774 aa		11.13	□□□□□ -0.63
LPIN1-215	ENST00000475922	PPP1R15A	O75807	674 aa	Predicted RBP	11.12	□□□□□ -0.63
LPIN1-215	ENST00000475922	NPM2	Q86SE8	214 aa	Known RBP	11.12	□□□□□ -0.63
LPIN1-215	ENST00000475922		A0A0G2JS52	829 aa		11.1	□□□□□ -0.63
LPIN1-215	ENST00000475922	CEP164	Q9UPV0	1460 aa		11.09	□□□□□ -0.63
LPIN1-215	ENST00000475922	DIEXF	Q68CQ4	756 aa	Known RBP	11.09	□□□□□ -0.63
LPIN1-215	ENST00000475922	RTL5	Q5HYW3	569 aa	Predicted RBP	11.08	□□□□□ -0.64
LPIN1-215	ENST00000475922	KCNH8	Q96L42	1107 aa		11.08	□□□□□ -0.64
LPIN1-215	ENST00000475922	TRH	P20396	242 aa	Predicted RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms