RNA–Protein interactions for RNA: ENST00000548180.5

ACTR6-204, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 2

Gene ACTR6, Length 1,747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-204ENST00000548180 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
ACTR6-204ENST00000548180 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
ACTR6-204ENST00000548180 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
ACTR6-204ENST00000548180 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
ACTR6-204ENST00000548180 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
ACTR6-204ENST00000548180 FOXD1Q16676 465 aa17.04■□□□□ 0.32
ACTR6-204ENST00000548180 MSH5O43196 834 aa16.45■□□□□ 0.22
ACTR6-204ENST00000548180 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
ACTR6-204ENST00000548180 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
ACTR6-204ENST00000548180 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
ACTR6-204ENST00000548180 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
ACTR6-204ENST00000548180 ADRA2BP18089 450 aa15.26■□□□□ 0.03
ACTR6-204ENST00000548180 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
ACTR6-204ENST00000548180 CCDC180Q9P1Z9 1646 aa14.71□□□□□ -0.05
ACTR6-204ENST00000548180 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
ACTR6-204ENST00000548180 ABCC9O60706 1549 aa14.37□□□□□ -0.11
ACTR6-204ENST00000548180 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
ACTR6-204ENST00000548180 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
ACTR6-204ENST00000548180 POTEHQ6S545 545 aa14.01□□□□□ -0.17
ACTR6-204ENST00000548180 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
ACTR6-204ENST00000548180 NACADO15069 1562 aa13.86□□□□□ -0.19
ACTR6-204ENST00000548180 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
ACTR6-204ENST00000548180 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
ACTR6-204ENST00000548180 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
ACTR6-204ENST00000548180 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
ACTR6-204ENST00000548180 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
ACTR6-204ENST00000548180 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
ACTR6-204ENST00000548180 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
ACTR6-204ENST00000548180 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
ACTR6-204ENST00000548180 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
ACTR6-204ENST00000548180 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
ACTR6-204ENST00000548180 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
ACTR6-204ENST00000548180 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
ACTR6-204ENST00000548180 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
ACTR6-204ENST00000548180 BICRAQ9NZM4 1560 aa13.34□□□□□ -0.27
ACTR6-204ENST00000548180 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
ACTR6-204ENST00000548180 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
ACTR6-204ENST00000548180 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
ACTR6-204ENST00000548180 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
ACTR6-204ENST00000548180 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
ACTR6-204ENST00000548180 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
ACTR6-204ENST00000548180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■□□□ 12.6
ACTR6-204ENST00000548180 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
ACTR6-204ENST00000548180 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
ACTR6-204ENST00000548180 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
ACTR6-204ENST00000548180 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
ACTR6-204ENST00000548180 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.37
ACTR6-204ENST00000548180 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
ACTR6-204ENST00000548180 DSG3P32926 999 aa12.68□□□□□ -0.38
ACTR6-204ENST00000548180 PEG3Q9GZU2 1588 aa12.67□□□□□ -0.38
ACTR6-204ENST00000548180 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
ACTR6-204ENST00000548180 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
ACTR6-204ENST00000548180 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
ACTR6-204ENST00000548180 CAPN15O75808 1086 aa12.58□□□□□ -0.4
ACTR6-204ENST00000548180 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
ACTR6-204ENST00000548180 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
ACTR6-204ENST00000548180 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
ACTR6-204ENST00000548180 ERCC6Q03468 1493 aa12.5□□□□□ -0.41
ACTR6-204ENST00000548180 WIZO95785 1651 aa12.47□□□□□ -0.41
ACTR6-204ENST00000548180 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
ACTR6-204ENST00000548180 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
ACTR6-204ENST00000548180 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
ACTR6-204ENST00000548180 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
ACTR6-204ENST00000548180 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
ACTR6-204ENST00000548180 CUX2O14529 1486 aa12.39□□□□□ -0.43
ACTR6-204ENST00000548180 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
ACTR6-204ENST00000548180 NESP48681 1621 aa12.36□□□□□ -0.43
ACTR6-204ENST00000548180 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
ACTR6-204ENST00000548180 APLP2Q06481 763 aa12.28□□□□□ -0.44
ACTR6-204ENST00000548180 CFTRP13569 1480 aa12.27□□□□□ -0.44
ACTR6-204ENST00000548180 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
ACTR6-204ENST00000548180 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
ACTR6-204ENST00000548180 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
ACTR6-204ENST00000548180 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
ACTR6-204ENST00000548180 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
ACTR6-204ENST00000548180 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
ACTR6-204ENST00000548180 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
ACTR6-204ENST00000548180 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
ACTR6-204ENST00000548180 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
ACTR6-204ENST00000548180 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
ACTR6-204ENST00000548180 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
ACTR6-204ENST00000548180 WDR62O43379 1518 aa12.19□□□□□ -0.46
ACTR6-204ENST00000548180 ABCB7O75027 752 aa12.17□□□□□ -0.46
ACTR6-204ENST00000548180 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
ACTR6-204ENST00000548180 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
ACTR6-204ENST00000548180 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.47
ACTR6-204ENST00000548180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
ACTR6-204ENST00000548180 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
ACTR6-204ENST00000548180 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
ACTR6-204ENST00000548180 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.49
ACTR6-204ENST00000548180 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
ACTR6-204ENST00000548180 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
ACTR6-204ENST00000548180 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
ACTR6-204ENST00000548180 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
ACTR6-204ENST00000548180 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
ACTR6-204ENST00000548180 POLA1P09884 1462 aaPredicted RBP11.9□□□□□ -0.51
ACTR6-204ENST00000548180 SOGA1O94964 1423 aa11.87□□□□□ -0.51
ACTR6-204ENST00000548180 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
ACTR6-204ENST00000548180 TARBP1Q13395 1621 aaKnown RBP11.85□□□□□ -0.51
ACTR6-204ENST00000548180 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms