RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 NISCHQ9Y2I1 1504 aa15.76■□□□□ 0.11
TMEM106C-215ENST00000550552 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
TMEM106C-215ENST00000550552 ABCC9O60706 1549 aa13.74□□□□□ -0.21
TMEM106C-215ENST00000550552 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
TMEM106C-215ENST00000550552 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
TMEM106C-215ENST00000550552 NACADO15069 1562 aa13.14□□□□□ -0.31
TMEM106C-215ENST00000550552 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
TMEM106C-215ENST00000550552 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
TMEM106C-215ENST00000550552 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
TMEM106C-215ENST00000550552 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
TMEM106C-215ENST00000550552 UNC13AQ9UPW8 1703 aa12.8□□□□□ -0.36
TMEM106C-215ENST00000550552 BICRAQ9NZM4 1560 aa12.8□□□□□ -0.36
TMEM106C-215ENST00000550552 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
TMEM106C-215ENST00000550552 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
TMEM106C-215ENST00000550552 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
TMEM106C-215ENST00000550552 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
TMEM106C-215ENST00000550552 CC2D2AQ9P2K1 1620 aa12.39□□□□□ -0.43
TMEM106C-215ENST00000550552 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
TMEM106C-215ENST00000550552 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
TMEM106C-215ENST00000550552 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
TMEM106C-215ENST00000550552 ATAD2BQ9ULI0 1458 aa12.18□□□□□ -0.46
TMEM106C-215ENST00000550552 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
TMEM106C-215ENST00000550552 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
TMEM106C-215ENST00000550552 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
TMEM106C-215ENST00000550552 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
TMEM106C-215ENST00000550552 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
TMEM106C-215ENST00000550552 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
TMEM106C-215ENST00000550552 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
TMEM106C-215ENST00000550552 WIZO95785 1651 aa11.99□□□□□ -0.49
TMEM106C-215ENST00000550552 NESP48681 1621 aa11.91□□□□□ -0.5
TMEM106C-215ENST00000550552 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
TMEM106C-215ENST00000550552 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
TMEM106C-215ENST00000550552 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
TMEM106C-215ENST00000550552 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
TMEM106C-215ENST00000550552 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.52
TMEM106C-215ENST00000550552 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
TMEM106C-215ENST00000550552 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
TMEM106C-215ENST00000550552 CFTRP13569 1480 aa11.75□□□□□ -0.53
TMEM106C-215ENST00000550552 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
TMEM106C-215ENST00000550552 CUX2O14529 1486 aa11.68□□□□□ -0.54
TMEM106C-215ENST00000550552 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
TMEM106C-215ENST00000550552 KIF21AQ7Z4S6 1674 aa11.67□□□□□ -0.54
TMEM106C-215ENST00000550552 THOC2Q8NI27 1593 aaKnown RBP11.64□□□□□ -0.55
TMEM106C-215ENST00000550552 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
TMEM106C-215ENST00000550552 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
TMEM106C-215ENST00000550552 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
TMEM106C-215ENST00000550552 WDR62O43379 1518 aa11.57□□□□□ -0.56
TMEM106C-215ENST00000550552 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
TMEM106C-215ENST00000550552 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
TMEM106C-215ENST00000550552 TOPBP1Q92547 1522 aa11.48□□□□□ -0.57
TMEM106C-215ENST00000550552 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
TMEM106C-215ENST00000550552 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
TMEM106C-215ENST00000550552 DNMBPQ6XZF7 1577 aa11.42□□□□□ -0.58
TMEM106C-215ENST00000550552 CUX1P39880 1505 aa11.4□□□□□ -0.59
TMEM106C-215ENST00000550552 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.59
TMEM106C-215ENST00000550552 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
TMEM106C-215ENST00000550552 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
TMEM106C-215ENST00000550552 SOGA1O94964 1423 aa11.37□□□□□ -0.59
TMEM106C-215ENST00000550552 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
TMEM106C-215ENST00000550552 AQRO60306 1485 aaKnown RBP eCLIP11.35□□□□□ -0.596e-6■■■■□ 25.1
TMEM106C-215ENST00000550552 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
TMEM106C-215ENST00000550552 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
TMEM106C-215ENST00000550552 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
TMEM106C-215ENST00000550552 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
TMEM106C-215ENST00000550552 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
TMEM106C-215ENST00000550552 SYNJ1O43426 1573 aa11.27□□□□□ -0.61
TMEM106C-215ENST00000550552 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-215ENST00000550552 TOP2BQ02880 1626 aa11.26□□□□□ -0.61
TMEM106C-215ENST00000550552 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
TMEM106C-215ENST00000550552 BIVM-ERCC5R4GMW8 1640 aa11.23□□□□□ -0.61
TMEM106C-215ENST00000550552 FBLN2P98095 1184 aa11.22□□□□□ -0.61
TMEM106C-215ENST00000550552 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
TMEM106C-215ENST00000550552 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
TMEM106C-215ENST00000550552 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
TMEM106C-215ENST00000550552 WDR97A6NE52 1622 aa11.18□□□□□ -0.62
TMEM106C-215ENST00000550552 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
TMEM106C-215ENST00000550552 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
TMEM106C-215ENST00000550552 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
TMEM106C-215ENST00000550552 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
TMEM106C-215ENST00000550552 IGF1RP08069 1367 aa11.11□□□□□ -0.63
TMEM106C-215ENST00000550552 CHD1O14646 1710 aa11.1□□□□□ -0.63
TMEM106C-215ENST00000550552 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
TMEM106C-215ENST00000550552 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
TMEM106C-215ENST00000550552 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
TMEM106C-215ENST00000550552 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
TMEM106C-215ENST00000550552 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
TMEM106C-215ENST00000550552 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
TMEM106C-215ENST00000550552 ADAMTS12P58397 1594 aa11.04□□□□□ -0.64
TMEM106C-215ENST00000550552 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
TMEM106C-215ENST00000550552 ARHGEF11O15085 1522 aa11.03□□□□□ -0.64
TMEM106C-215ENST00000550552 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
TMEM106C-215ENST00000550552 NUP160Q12769 1436 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 RIMBP3CA6NJZ7 1639 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 RIMBP3BA6NNM3 1639 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 RIMBP3Q9UFD9 1639 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
TMEM106C-215ENST00000550552 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
TMEM106C-215ENST00000550552 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
TMEM106C-215ENST00000550552 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms