RNA–Protein interactions for RNA: ENST00000552546.5

TMEM106C-219, Transcript of transmembrane protein 106C, humanhuman

TSL 4 BASIC

Gene TMEM106C, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-219ENST00000552546 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
TMEM106C-219ENST00000552546 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
TMEM106C-219ENST00000552546 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
TMEM106C-219ENST00000552546 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
TMEM106C-219ENST00000552546 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
TMEM106C-219ENST00000552546 FOXD1Q16676 465 aa18.68■□□□□ 0.58
TMEM106C-219ENST00000552546 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
TMEM106C-219ENST00000552546 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
TMEM106C-219ENST00000552546 ADRA2BP18089 450 aa18.09■□□□□ 0.49
TMEM106C-219ENST00000552546 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
TMEM106C-219ENST00000552546 MSH5O43196 834 aa17.2■□□□□ 0.34
TMEM106C-219ENST00000552546 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
TMEM106C-219ENST00000552546 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
TMEM106C-219ENST00000552546 KCNA4P22459 653 aa16.61■□□□□ 0.25
TMEM106C-219ENST00000552546 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
TMEM106C-219ENST00000552546 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
TMEM106C-219ENST00000552546 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
TMEM106C-219ENST00000552546 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
TMEM106C-219ENST00000552546 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
TMEM106C-219ENST00000552546 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
TMEM106C-219ENST00000552546 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
TMEM106C-219ENST00000552546 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
TMEM106C-219ENST00000552546 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
TMEM106C-219ENST00000552546 ABCC9O60706 1549 aa15.86■□□□□ 0.13
TMEM106C-219ENST00000552546 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
TMEM106C-219ENST00000552546 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
TMEM106C-219ENST00000552546 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
TMEM106C-219ENST00000552546 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
TMEM106C-219ENST00000552546 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
TMEM106C-219ENST00000552546 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
TMEM106C-219ENST00000552546 NACADO15069 1562 aa15.36■□□□□ 0.05
TMEM106C-219ENST00000552546 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
TMEM106C-219ENST00000552546 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
TMEM106C-219ENST00000552546 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
TMEM106C-219ENST00000552546 RB1CC1Q8TDY2 1594 aa15.3■□□□□ 0.04
TMEM106C-219ENST00000552546 ZBTB22O15209 634 aa15.27■□□□□ 0.04
TMEM106C-219ENST00000552546 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
TMEM106C-219ENST00000552546 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
TMEM106C-219ENST00000552546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
TMEM106C-219ENST00000552546 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
TMEM106C-219ENST00000552546 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
TMEM106C-219ENST00000552546 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
TMEM106C-219ENST00000552546 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
TMEM106C-219ENST00000552546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
TMEM106C-219ENST00000552546 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
TMEM106C-219ENST00000552546 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
TMEM106C-219ENST00000552546 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
TMEM106C-219ENST00000552546 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
TMEM106C-219ENST00000552546 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
TMEM106C-219ENST00000552546 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
TMEM106C-219ENST00000552546 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
TMEM106C-219ENST00000552546 APLP2Q06481 763 aa14.62□□□□□ -0.07
TMEM106C-219ENST00000552546 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
TMEM106C-219ENST00000552546 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
TMEM106C-219ENST00000552546 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
TMEM106C-219ENST00000552546 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
TMEM106C-219ENST00000552546 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
TMEM106C-219ENST00000552546 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
TMEM106C-219ENST00000552546 CAPN15O75808 1086 aa14.35□□□□□ -0.11
TMEM106C-219ENST00000552546 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
TMEM106C-219ENST00000552546 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
TMEM106C-219ENST00000552546 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
TMEM106C-219ENST00000552546 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
TMEM106C-219ENST00000552546 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
TMEM106C-219ENST00000552546 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
TMEM106C-219ENST00000552546 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
TMEM106C-219ENST00000552546 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
TMEM106C-219ENST00000552546 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
TMEM106C-219ENST00000552546 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
TMEM106C-219ENST00000552546 PEG3Q9GZU2 1588 aa14.16□□□□□ -0.14
TMEM106C-219ENST00000552546 POLA2Q14181 598 aa14.15□□□□□ -0.14
TMEM106C-219ENST00000552546 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
TMEM106C-219ENST00000552546 HMGXB3Q12766 1538 aa14.09□□□□□ -0.15
TMEM106C-219ENST00000552546 ABCB7O75027 752 aa14.08□□□□□ -0.16
TMEM106C-219ENST00000552546 DSG3P32926 999 aa14.08□□□□□ -0.16
TMEM106C-219ENST00000552546 SUPT5HO00267 1087 aaKnown RBP14.05□□□□□ -0.16
TMEM106C-219ENST00000552546 WIZO95785 1651 aa14.04□□□□□ -0.16
TMEM106C-219ENST00000552546 FBLN2P98095 1184 aa13.96□□□□□ -0.17
TMEM106C-219ENST00000552546 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
TMEM106C-219ENST00000552546 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
TMEM106C-219ENST00000552546 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
TMEM106C-219ENST00000552546 FKBP8Q14318 412 aa13.86□□□□□ -0.19
TMEM106C-219ENST00000552546 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
TMEM106C-219ENST00000552546 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
TMEM106C-219ENST00000552546 CFTRP13569 1480 aa13.76□□□□□ -0.21
TMEM106C-219ENST00000552546 NESP48681 1621 aa13.75□□□□□ -0.21
TMEM106C-219ENST00000552546 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
TMEM106C-219ENST00000552546 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
TMEM106C-219ENST00000552546 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
TMEM106C-219ENST00000552546 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
TMEM106C-219ENST00000552546 FANCD2Q9BXW9 1451 aa13.63□□□□□ -0.23
TMEM106C-219ENST00000552546 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
TMEM106C-219ENST00000552546 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
TMEM106C-219ENST00000552546 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
TMEM106C-219ENST00000552546 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
TMEM106C-219ENST00000552546 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
TMEM106C-219ENST00000552546 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
TMEM106C-219ENST00000552546 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
TMEM106C-219ENST00000552546 PROM2Q8N271 834 aa13.5□□□□□ -0.25
TMEM106C-219ENST00000552546 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 541.8 ms