RNA–Protein interactions for RNA: ENST00000368864.8

RPF2-201, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 5

Gene RPF2, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-201ENST00000368864 AEBP2Q6ZN18 517 aaPredicted RBP26.6■■□□□ 1.85
RPF2-201ENST00000368864 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
RPF2-201ENST00000368864 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
RPF2-201ENST00000368864 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
RPF2-201ENST00000368864 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
RPF2-201ENST00000368864 FOXD1Q16676 465 aa20.98■□□□□ 0.95
RPF2-201ENST00000368864 ADRA2BP18089 450 aa20.31■□□□□ 0.84
RPF2-201ENST00000368864 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
RPF2-201ENST00000368864 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
RPF2-201ENST00000368864 POTEDQ86YR6 584 aa19.68■□□□□ 0.74
RPF2-201ENST00000368864 MSH5O43196 834 aa19.53■□□□□ 0.72
RPF2-201ENST00000368864 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
RPF2-201ENST00000368864 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
RPF2-201ENST00000368864 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
RPF2-201ENST00000368864 KCNA4P22459 653 aa18.75■□□□□ 0.59
RPF2-201ENST00000368864 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
RPF2-201ENST00000368864 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
RPF2-201ENST00000368864 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
RPF2-201ENST00000368864 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
RPF2-201ENST00000368864 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
RPF2-201ENST00000368864 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
RPF2-201ENST00000368864 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
RPF2-201ENST00000368864 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
RPF2-201ENST00000368864 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
RPF2-201ENST00000368864 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
RPF2-201ENST00000368864 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
RPF2-201ENST00000368864 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
RPF2-201ENST00000368864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.347e-7■■□□□ 14.5
RPF2-201ENST00000368864 ZBTB22O15209 634 aa17.14■□□□□ 0.33
RPF2-201ENST00000368864 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
RPF2-201ENST00000368864 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
RPF2-201ENST00000368864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
RPF2-201ENST00000368864 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
RPF2-201ENST00000368864 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
RPF2-201ENST00000368864 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
RPF2-201ENST00000368864 APLP2Q06481 763 aa16.83■□□□□ 0.28
RPF2-201ENST00000368864 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
RPF2-201ENST00000368864 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
RPF2-201ENST00000368864 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
RPF2-201ENST00000368864 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
RPF2-201ENST00000368864 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
RPF2-201ENST00000368864 CAPN15O75808 1086 aa16.28■□□□□ 0.2
RPF2-201ENST00000368864 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
RPF2-201ENST00000368864 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
RPF2-201ENST00000368864 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
RPF2-201ENST00000368864 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
RPF2-201ENST00000368864 FBLN2P98095 1184 aa15.98■□□□□ 0.15
RPF2-201ENST00000368864 POLA2Q14181 598 aa15.96■□□□□ 0.15
RPF2-201ENST00000368864 ABCB7O75027 752 aa15.87■□□□□ 0.13
RPF2-201ENST00000368864 NISCHQ9Y2I1 1504 aa15.84■□□□□ 0.13
RPF2-201ENST00000368864 DSG3P32926 999 aa15.83■□□□□ 0.12
RPF2-201ENST00000368864 FKBP8Q14318 412 aa15.78■□□□□ 0.12
RPF2-201ENST00000368864 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
RPF2-201ENST00000368864 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
RPF2-201ENST00000368864 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
RPF2-201ENST00000368864 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
RPF2-201ENST00000368864 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
RPF2-201ENST00000368864 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
RPF2-201ENST00000368864 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
RPF2-201ENST00000368864 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
RPF2-201ENST00000368864 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
RPF2-201ENST00000368864 POTEHQ6S545 545 aa15.32■□□□□ 0.04
RPF2-201ENST00000368864 PROM2Q8N271 834 aa15.27■□□□□ 0.04
RPF2-201ENST00000368864 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
RPF2-201ENST00000368864 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
RPF2-201ENST00000368864 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
RPF2-201ENST00000368864 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
RPF2-201ENST00000368864 VASPP50552 380 aaPredicted RBP14.98□□□□□ -0.01
RPF2-201ENST00000368864 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
RPF2-201ENST00000368864 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
RPF2-201ENST00000368864 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
RPF2-201ENST00000368864 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
RPF2-201ENST00000368864 PLCD3Q8N3E9 789 aa14.85□□□□□ -0.03
RPF2-201ENST00000368864 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
RPF2-201ENST00000368864 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
RPF2-201ENST00000368864 MIER1Q8N108 512 aa14.78□□□□□ -0.04
RPF2-201ENST00000368864 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
RPF2-201ENST00000368864 PRR29P0C7W0 189 aa14.74□□□□□ -0.05
RPF2-201ENST00000368864 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
RPF2-201ENST00000368864 IFNLR1Q8IU57 520 aaPredicted RBP14.66□□□□□ -0.06
RPF2-201ENST00000368864 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
RPF2-201ENST00000368864 RTN4Q9NQC3 1192 aaKnown RBP14.64□□□□□ -0.07
RPF2-201ENST00000368864 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPF2-201ENST00000368864 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
RPF2-201ENST00000368864 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
RPF2-201ENST00000368864 GSE1Q14687 1217 aa14.39□□□□□ -0.11
RPF2-201ENST00000368864 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
RPF2-201ENST00000368864 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
RPF2-201ENST00000368864 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
RPF2-201ENST00000368864 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
RPF2-201ENST00000368864 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
RPF2-201ENST00000368864 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
RPF2-201ENST00000368864 ECM2O94769 699 aaPredicted RBP14.27□□□□□ -0.13
RPF2-201ENST00000368864 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
RPF2-201ENST00000368864 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
RPF2-201ENST00000368864 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
RPF2-201ENST00000368864 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
RPF2-201ENST00000368864 NUBP1P53384 320 aa14.25□□□□□ -0.13
RPF2-201ENST00000368864 PKD2Q13563 968 aa14.25□□□□□ -0.13
RPF2-201ENST00000368864 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms