RNA–Protein interactions for RNA: ENST00000592749.1

POP4-212, Transcript of POP4 homolog, ribonuclease P/MRP subunit, humanhuman

TSL 5

Gene POP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POP4-212ENST00000592749 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
POP4-212ENST00000592749 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
POP4-212ENST00000592749 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
POP4-212ENST00000592749 PHF23Q9BUL5 403 aaPredicted RBP24.12■■□□□ 1.45
POP4-212ENST00000592749 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
POP4-212ENST00000592749 FOXD1Q16676 465 aa22.77■■□□□ 1.24
POP4-212ENST00000592749 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
POP4-212ENST00000592749 MSH5O43196 834 aa21.37■■□□□ 1.01
POP4-212ENST00000592749 PIAS4Q8N2W9 510 aaPredicted RBP21.26■□□□□ 0.99
POP4-212ENST00000592749 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
POP4-212ENST00000592749 ADRA2BP18089 450 aa21.17■□□□□ 0.98
POP4-212ENST00000592749 ABCC9O60706 1549 aa21.14■□□□□ 0.98
POP4-212ENST00000592749 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
POP4-212ENST00000592749 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
POP4-212ENST00000592749 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
POP4-212ENST00000592749 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
POP4-212ENST00000592749 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
POP4-212ENST00000592749 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
POP4-212ENST00000592749 NACADO15069 1562 aa19.59■□□□□ 0.73
POP4-212ENST00000592749 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
POP4-212ENST00000592749 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
POP4-212ENST00000592749 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
POP4-212ENST00000592749 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
POP4-212ENST00000592749 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
POP4-212ENST00000592749 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
POP4-212ENST00000592749 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
POP4-212ENST00000592749 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
POP4-212ENST00000592749 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
POP4-212ENST00000592749 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
POP4-212ENST00000592749 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
POP4-212ENST00000592749 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.6
POP4-212ENST00000592749 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
POP4-212ENST00000592749 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
POP4-212ENST00000592749 DCAF1Q9Y4B6 1507 aa18.71■□□□□ 0.59
POP4-212ENST00000592749 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
POP4-212ENST00000592749 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
POP4-212ENST00000592749 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
POP4-212ENST00000592749 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
POP4-212ENST00000592749 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
POP4-212ENST00000592749 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
POP4-212ENST00000592749 CUX2O14529 1486 aa18.3■□□□□ 0.52
POP4-212ENST00000592749 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
POP4-212ENST00000592749 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
POP4-212ENST00000592749 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
POP4-212ENST00000592749 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
POP4-212ENST00000592749 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
POP4-212ENST00000592749 NESP48681 1621 aa18.01■□□□□ 0.47
POP4-212ENST00000592749 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
POP4-212ENST00000592749 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
POP4-212ENST00000592749 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
POP4-212ENST00000592749 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
POP4-212ENST00000592749 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
POP4-212ENST00000592749 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
POP4-212ENST00000592749 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
POP4-212ENST00000592749 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
POP4-212ENST00000592749 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
POP4-212ENST00000592749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
POP4-212ENST00000592749 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
POP4-212ENST00000592749 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
POP4-212ENST00000592749 KCNA4P22459 653 aa17.64■□□□□ 0.41
POP4-212ENST00000592749 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
POP4-212ENST00000592749 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
POP4-212ENST00000592749 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
POP4-212ENST00000592749 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
POP4-212ENST00000592749 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
POP4-212ENST00000592749 WDR62O43379 1518 aa17.47■□□□□ 0.39
POP4-212ENST00000592749 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
POP4-212ENST00000592749 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
POP4-212ENST00000592749 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
POP4-212ENST00000592749 WIZO95785 1651 aa17.36■□□□□ 0.37
POP4-212ENST00000592749 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
POP4-212ENST00000592749 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
POP4-212ENST00000592749 CFTRP13569 1480 aa17.24■□□□□ 0.35
POP4-212ENST00000592749 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
POP4-212ENST00000592749 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
POP4-212ENST00000592749 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
POP4-212ENST00000592749 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
POP4-212ENST00000592749 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
POP4-212ENST00000592749 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
POP4-212ENST00000592749 FBLN2P98095 1184 aa17.13■□□□□ 0.33
POP4-212ENST00000592749 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
POP4-212ENST00000592749 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
POP4-212ENST00000592749 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
POP4-212ENST00000592749 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
POP4-212ENST00000592749 CAPN15O75808 1086 aa17.08■□□□□ 0.32
POP4-212ENST00000592749 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
POP4-212ENST00000592749 DSG3P32926 999 aa17.04■□□□□ 0.32
POP4-212ENST00000592749 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
POP4-212ENST00000592749 APLP2Q06481 763 aa16.98■□□□□ 0.31
POP4-212ENST00000592749 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
POP4-212ENST00000592749 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
POP4-212ENST00000592749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
POP4-212ENST00000592749 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
POP4-212ENST00000592749 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
POP4-212ENST00000592749 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
POP4-212ENST00000592749 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
POP4-212ENST00000592749 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
POP4-212ENST00000592749 CHD1O14646 1710 aa16.92■□□□□ 0.3
POP4-212ENST00000592749 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
POP4-212ENST00000592749 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms