RNA–Protein interactions for RNA: ENST00000596239.1

TIMM50-207, Transcript of translocase of inner mitochondrial membrane 50, humanhuman

TSL 2

Gene TIMM50, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM50-207ENST00000596239 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
TIMM50-207ENST00000596239 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
TIMM50-207ENST00000596239 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
TIMM50-207ENST00000596239 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
TIMM50-207ENST00000596239 FOXD1Q16676 465 aa20.68■□□□□ 0.9
TIMM50-207ENST00000596239 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
TIMM50-207ENST00000596239 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
TIMM50-207ENST00000596239 ADRA2BP18089 450 aa19.72■□□□□ 0.75
TIMM50-207ENST00000596239 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
TIMM50-207ENST00000596239 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
TIMM50-207ENST00000596239 MSH5O43196 834 aa19.07■□□□□ 0.64
TIMM50-207ENST00000596239 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
TIMM50-207ENST00000596239 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
TIMM50-207ENST00000596239 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
TIMM50-207ENST00000596239 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
TIMM50-207ENST00000596239 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
TIMM50-207ENST00000596239 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
TIMM50-207ENST00000596239 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
TIMM50-207ENST00000596239 KCNA4P22459 653 aa17.34■□□□□ 0.37
TIMM50-207ENST00000596239 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
TIMM50-207ENST00000596239 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
TIMM50-207ENST00000596239 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
TIMM50-207ENST00000596239 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
TIMM50-207ENST00000596239 ABCC9O60706 1549 aa17.06■□□□□ 0.32
TIMM50-207ENST00000596239 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
TIMM50-207ENST00000596239 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
TIMM50-207ENST00000596239 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
TIMM50-207ENST00000596239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
TIMM50-207ENST00000596239 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
TIMM50-207ENST00000596239 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
TIMM50-207ENST00000596239 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
TIMM50-207ENST00000596239 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
TIMM50-207ENST00000596239 NACADO15069 1562 aa16.26■□□□□ 0.19
TIMM50-207ENST00000596239 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
TIMM50-207ENST00000596239 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
TIMM50-207ENST00000596239 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
TIMM50-207ENST00000596239 MYO15BQ96JP2 1530 aa16.04■□□□□ 0.16
TIMM50-207ENST00000596239 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
TIMM50-207ENST00000596239 ZBTB22O15209 634 aa15.98■□□□□ 0.15
TIMM50-207ENST00000596239 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
TIMM50-207ENST00000596239 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
TIMM50-207ENST00000596239 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
TIMM50-207ENST00000596239 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
TIMM50-207ENST00000596239 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
TIMM50-207ENST00000596239 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
TIMM50-207ENST00000596239 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
TIMM50-207ENST00000596239 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
TIMM50-207ENST00000596239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
TIMM50-207ENST00000596239 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
TIMM50-207ENST00000596239 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
TIMM50-207ENST00000596239 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
TIMM50-207ENST00000596239 CAPN15O75808 1086 aa15.71■□□□□ 0.11
TIMM50-207ENST00000596239 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
TIMM50-207ENST00000596239 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
TIMM50-207ENST00000596239 APLP2Q06481 763 aa15.62■□□□□ 0.09
TIMM50-207ENST00000596239 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
TIMM50-207ENST00000596239 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
TIMM50-207ENST00000596239 DSG3P32926 999 aa15.51■□□□□ 0.07
TIMM50-207ENST00000596239 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
TIMM50-207ENST00000596239 ABCB7O75027 752 aa15.45■□□□□ 0.06
TIMM50-207ENST00000596239 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
TIMM50-207ENST00000596239 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
TIMM50-207ENST00000596239 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
TIMM50-207ENST00000596239 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
TIMM50-207ENST00000596239 POLA2Q14181 598 aa15.3■□□□□ 0.04
TIMM50-207ENST00000596239 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
TIMM50-207ENST00000596239 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
TIMM50-207ENST00000596239 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
TIMM50-207ENST00000596239 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
TIMM50-207ENST00000596239 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
TIMM50-207ENST00000596239 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
TIMM50-207ENST00000596239 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
TIMM50-207ENST00000596239 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
TIMM50-207ENST00000596239 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
TIMM50-207ENST00000596239 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
TIMM50-207ENST00000596239 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
TIMM50-207ENST00000596239 FBLN2P98095 1184 aa14.8□□□□□ -0.04
TIMM50-207ENST00000596239 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
TIMM50-207ENST00000596239 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
TIMM50-207ENST00000596239 WIZO95785 1651 aa14.7□□□□□ -0.06
TIMM50-207ENST00000596239 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
TIMM50-207ENST00000596239 NESP48681 1621 aa14.66□□□□□ -0.06
TIMM50-207ENST00000596239 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
TIMM50-207ENST00000596239 CUX2O14529 1486 aa14.63□□□□□ -0.07
TIMM50-207ENST00000596239 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.07
TIMM50-207ENST00000596239 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.08
TIMM50-207ENST00000596239 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
TIMM50-207ENST00000596239 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
TIMM50-207ENST00000596239 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
TIMM50-207ENST00000596239 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
TIMM50-207ENST00000596239 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
TIMM50-207ENST00000596239 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
TIMM50-207ENST00000596239 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
TIMM50-207ENST00000596239 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
TIMM50-207ENST00000596239 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
TIMM50-207ENST00000596239 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
TIMM50-207ENST00000596239 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
TIMM50-207ENST00000596239 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
TIMM50-207ENST00000596239 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
TIMM50-207ENST00000596239 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms