RNA–Protein interactions for RNA: ENST00000549287.1

TMEM106C-211, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-211ENST00000549287 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
TMEM106C-211ENST00000549287 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
TMEM106C-211ENST00000549287 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
TMEM106C-211ENST00000549287 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
TMEM106C-211ENST00000549287 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
TMEM106C-211ENST00000549287 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
TMEM106C-211ENST00000549287 FOXD1Q16676 465 aa14.35□□□□□ -0.11
TMEM106C-211ENST00000549287 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
TMEM106C-211ENST00000549287 ADRA2BP18089 450 aa13.98□□□□□ -0.17
TMEM106C-211ENST00000549287 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
TMEM106C-211ENST00000549287 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
TMEM106C-211ENST00000549287 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
TMEM106C-211ENST00000549287 MSH5O43196 834 aa13.05□□□□□ -0.32
TMEM106C-211ENST00000549287 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
TMEM106C-211ENST00000549287 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
TMEM106C-211ENST00000549287 KCNA4P22459 653 aa12.87□□□□□ -0.35
TMEM106C-211ENST00000549287 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
TMEM106C-211ENST00000549287 SUPT5HO00267 1087 aaKnown RBP12.78□□□□□ -0.36
TMEM106C-211ENST00000549287 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
TMEM106C-211ENST00000549287 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
TMEM106C-211ENST00000549287 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
TMEM106C-211ENST00000549287 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
TMEM106C-211ENST00000549287 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
TMEM106C-211ENST00000549287 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
TMEM106C-211ENST00000549287 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
TMEM106C-211ENST00000549287 HRCP23327 699 aa12.41□□□□□ -0.42
TMEM106C-211ENST00000549287 DMRT2Q9Y5R5 561 aa12.34□□□□□ -0.43
TMEM106C-211ENST00000549287 ABCC9O60706 1549 aa12.32□□□□□ -0.44
TMEM106C-211ENST00000549287 NACADO15069 1562 aa12.3□□□□□ -0.44
TMEM106C-211ENST00000549287 ZEB1P37275 1124 aaPredicted RBP12.25□□□□□ -0.45
TMEM106C-211ENST00000549287 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
TMEM106C-211ENST00000549287 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
TMEM106C-211ENST00000549287 RSF1Q96T23 1441 aaPredicted RBP12.21□□□□□ -0.45
TMEM106C-211ENST00000549287 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
TMEM106C-211ENST00000549287 RB1CC1Q8TDY2 1594 aa12.21□□□□□ -0.46
TMEM106C-211ENST00000549287 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
TMEM106C-211ENST00000549287 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
TMEM106C-211ENST00000549287 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
TMEM106C-211ENST00000549287 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
TMEM106C-211ENST00000549287 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
TMEM106C-211ENST00000549287 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
TMEM106C-211ENST00000549287 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
TMEM106C-211ENST00000549287 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
TMEM106C-211ENST00000549287 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
TMEM106C-211ENST00000549287 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
TMEM106C-211ENST00000549287 EEA1Q15075 1411 aa11.86□□□□□ -0.51
TMEM106C-211ENST00000549287 ZBTB22O15209 634 aa11.86□□□□□ -0.51
TMEM106C-211ENST00000549287 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
TMEM106C-211ENST00000549287 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
TMEM106C-211ENST00000549287 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
TMEM106C-211ENST00000549287 WIZO95785 1651 aa11.8□□□□□ -0.52
TMEM106C-211ENST00000549287 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
TMEM106C-211ENST00000549287 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
TMEM106C-211ENST00000549287 WRNQ14191 1432 aaPredicted RBP eCLIP11.74□□□□□ -0.53
TMEM106C-211ENST00000549287 SMARCA4P51532 1647 aa11.74□□□□□ -0.53
TMEM106C-211ENST00000549287 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
TMEM106C-211ENST00000549287 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
TMEM106C-211ENST00000549287 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
TMEM106C-211ENST00000549287 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.53
TMEM106C-211ENST00000549287 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
TMEM106C-211ENST00000549287 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
TMEM106C-211ENST00000549287 CCDC88BA6NC98 1476 aa11.68□□□□□ -0.54
TMEM106C-211ENST00000549287 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
TMEM106C-211ENST00000549287 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
TMEM106C-211ENST00000549287 CCER1Q8TC90 406 aaPredicted RBP11.58□□□□□ -0.56
TMEM106C-211ENST00000549287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM106C-211ENST00000549287 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
TMEM106C-211ENST00000549287 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
TMEM106C-211ENST00000549287 CEP162Q5TB80 1403 aa11.55□□□□□ -0.56
TMEM106C-211ENST00000549287 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
TMEM106C-211ENST00000549287 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
TMEM106C-211ENST00000549287 CENPBP07199 599 aaPredicted RBP11.51□□□□□ -0.57
TMEM106C-211ENST00000549287 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
TMEM106C-211ENST00000549287 KIF21BO75037 1637 aa11.49□□□□□ -0.57
TMEM106C-211ENST00000549287 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
TMEM106C-211ENST00000549287 BICRAQ9NZM4 1560 aa11.47□□□□□ -0.57
TMEM106C-211ENST00000549287 APLP2Q06481 763 aa11.47□□□□□ -0.57
TMEM106C-211ENST00000549287 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
TMEM106C-211ENST00000549287 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
TMEM106C-211ENST00000549287 SOGA1O94964 1423 aa11.44□□□□□ -0.58
TMEM106C-211ENST00000549287 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
TMEM106C-211ENST00000549287 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
TMEM106C-211ENST00000549287 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-211ENST00000549287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
TMEM106C-211ENST00000549287 ZNF316A6NFI3 1004 aaPredicted RBP11.39□□□□□ -0.59
TMEM106C-211ENST00000549287 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
TMEM106C-211ENST00000549287 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
TMEM106C-211ENST00000549287 MYT1Q01538 1121 aa11.37□□□□□ -0.59
TMEM106C-211ENST00000549287 CLIP1P30622 1438 aa11.36□□□□□ -0.59
TMEM106C-211ENST00000549287 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
TMEM106C-211ENST00000549287 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
TMEM106C-211ENST00000549287 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
TMEM106C-211ENST00000549287 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
TMEM106C-211ENST00000549287 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
TMEM106C-211ENST00000549287 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM106C-211ENST00000549287 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
TMEM106C-211ENST00000549287 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
TMEM106C-211ENST00000549287 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
TMEM106C-211ENST00000549287 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
TMEM106C-211ENST00000549287 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms