RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
TMEM106C-220ENST00000552561 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
TMEM106C-220ENST00000552561 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
TMEM106C-220ENST00000552561 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
TMEM106C-220ENST00000552561 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
TMEM106C-220ENST00000552561 PHF23Q9BUL5 403 aaPredicted RBP10.61□□□□□ -0.71
TMEM106C-220ENST00000552561 CCDC180Q9P1Z9 1646 aa10.23□□□□□ -0.77
TMEM106C-220ENST00000552561 ABCC9O60706 1549 aa10.15□□□□□ -0.78
TMEM106C-220ENST00000552561 FOXD1Q16676 465 aa10.1□□□□□ -0.79
TMEM106C-220ENST00000552561 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
TMEM106C-220ENST00000552561 RB1CC1Q8TDY2 1594 aa9.69□□□□□ -0.86
TMEM106C-220ENST00000552561 NACADO15069 1562 aa9.67□□□□□ -0.86
TMEM106C-220ENST00000552561 MSH5O43196 834 aa9.67□□□□□ -0.86
TMEM106C-220ENST00000552561 MYO15BQ96JP2 1530 aa9.65□□□□□ -0.86
TMEM106C-220ENST00000552561 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
TMEM106C-220ENST00000552561 DCAF1Q9Y4B6 1507 aa9.49□□□□□ -0.89
TMEM106C-220ENST00000552561 UNC13AQ9UPW8 1703 aa9.45□□□□□ -0.9
TMEM106C-220ENST00000552561 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
TMEM106C-220ENST00000552561 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
TMEM106C-220ENST00000552561 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
TMEM106C-220ENST00000552561 PLPPR3Q6T4P5 718 aa9.42□□□□□ -0.9
TMEM106C-220ENST00000552561 PIAS4Q8N2W9 510 aaPredicted RBP9.37□□□□□ -0.91
TMEM106C-220ENST00000552561 PABPN1Q86U42 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
TMEM106C-220ENST00000552561 DCAF8L2P0C7V8 631 aa9.31□□□□□ -0.92
TMEM106C-220ENST00000552561 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
TMEM106C-220ENST00000552561 ADRA2BP18089 450 aa9.26□□□□□ -0.93
TMEM106C-220ENST00000552561 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
TMEM106C-220ENST00000552561 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
TMEM106C-220ENST00000552561 CC2D2AQ9P2K1 1620 aa9.16□□□□□ -0.94
TMEM106C-220ENST00000552561 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
TMEM106C-220ENST00000552561 CUX2O14529 1486 aa9.08□□□□□ -0.96
TMEM106C-220ENST00000552561 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
TMEM106C-220ENST00000552561 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
TMEM106C-220ENST00000552561 ERCC6Q03468 1493 aa8.94□□□□□ -0.98
TMEM106C-220ENST00000552561 HMGXB3Q12766 1538 aa8.87□□□□□ -0.99
TMEM106C-220ENST00000552561 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
TMEM106C-220ENST00000552561 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
TMEM106C-220ENST00000552561 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
TMEM106C-220ENST00000552561 SMARCA4P51532 1647 aa8.83□□□□□ -1
TMEM106C-220ENST00000552561 CACNB1Q02641 598 aaPredicted RBP8.82□□□□□ -1
TMEM106C-220ENST00000552561 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
TMEM106C-220ENST00000552561 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
TMEM106C-220ENST00000552561 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.02
TMEM106C-220ENST00000552561 MROH2BQ7Z745 1585 aa8.7□□□□□ -1.02
TMEM106C-220ENST00000552561 NESP48681 1621 aa8.67□□□□□ -1.02
TMEM106C-220ENST00000552561 THOC2Q8NI27 1593 aaKnown RBP8.66□□□□□ -1.02
TMEM106C-220ENST00000552561 PDS5BQ9NTI5 1447 aa8.63□□□□□ -1.03
TMEM106C-220ENST00000552561 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
TMEM106C-220ENST00000552561 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
TMEM106C-220ENST00000552561 WDR62O43379 1518 aa8.56□□□□□ -1.04
TMEM106C-220ENST00000552561 CFTRP13569 1480 aa8.56□□□□□ -1.04
TMEM106C-220ENST00000552561 WIZO95785 1651 aa8.56□□□□□ -1.04
TMEM106C-220ENST00000552561 MAPK8IP2Q13387 824 aaPredicted RBP8.55□□□□□ -1.04
TMEM106C-220ENST00000552561 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-220ENST00000552561 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
TMEM106C-220ENST00000552561 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
TMEM106C-220ENST00000552561 TOP2AP11388 1531 aaKnown RBP8.51□□□□□ -1.05
TMEM106C-220ENST00000552561 OSCARQ8IYS5 282 aa8.49□□□□□ -1.05
TMEM106C-220ENST00000552561 CEP164Q9UPV0 1460 aa8.49□□□□□ -1.05
TMEM106C-220ENST00000552561 TRHP20396 242 aaPredicted RBP8.48□□□□□ -1.05
TMEM106C-220ENST00000552561 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
TMEM106C-220ENST00000552561 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
TMEM106C-220ENST00000552561 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
TMEM106C-220ENST00000552561 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
TMEM106C-220ENST00000552561 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
TMEM106C-220ENST00000552561 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
TMEM106C-220ENST00000552561 URB2Q14146 1524 aaKnown RBP8.42□□□□□ -1.06
TMEM106C-220ENST00000552561 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
TMEM106C-220ENST00000552561 ABCC8Q09428 1581 aa8.38□□□□□ -1.07
TMEM106C-220ENST00000552561 ARHGEF11O15085 1522 aa8.38□□□□□ -1.07
TMEM106C-220ENST00000552561 POTEHQ6S545 545 aa8.37□□□□□ -1.07
TMEM106C-220ENST00000552561 IFT140Q96RY7 1462 aa8.36□□□□□ -1.07
TMEM106C-220ENST00000552561 TOPBP1Q92547 1522 aa8.34□□□□□ -1.08
TMEM106C-220ENST00000552561 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
TMEM106C-220ENST00000552561 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
TMEM106C-220ENST00000552561 TARBP1Q13395 1621 aaKnown RBP8.29□□□□□ -1.08
TMEM106C-220ENST00000552561 CYB5RLQ6IPT4 315 aa8.29□□□□□ -1.08
TMEM106C-220ENST00000552561 WDR97A6NE52 1622 aa8.29□□□□□ -1.08
TMEM106C-220ENST00000552561 ILDR1Q86SU0 546 aaPredicted RBP8.27□□□□□ -1.09
TMEM106C-220ENST00000552561 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
TMEM106C-220ENST00000552561 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
TMEM106C-220ENST00000552561 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
TMEM106C-220ENST00000552561 RNF39Q9H2S5 420 aa8.23□□□□□ -1.09
TMEM106C-220ENST00000552561 ARAP1Q96P48 1450 aa8.22□□□□□ -1.09
TMEM106C-220ENST00000552561 AQRO60306 1485 aaKnown RBP eCLIP8.19□□□□□ -1.16e-6■■■■□ 25.1
TMEM106C-220ENST00000552561 SOGA1O94964 1423 aa8.18□□□□□ -1.1
TMEM106C-220ENST00000552561 MAGI1Q96QZ7 1491 aaPredicted RBP8.18□□□□□ -1.1
TMEM106C-220ENST00000552561 CUX1P39880 1505 aa8.18□□□□□ -1.1
TMEM106C-220ENST00000552561 DCAF8L1A6NGE4 600 aa8.17□□□□□ -1.1
TMEM106C-220ENST00000552561 FGD5Q6ZNL6 1462 aa8.17□□□□□ -1.1
TMEM106C-220ENST00000552561 CHD1O14646 1710 aa8.17□□□□□ -1.1
TMEM106C-220ENST00000552561 HOXD11P31277 338 aaPredicted RBP8.16□□□□□ -1.1
TMEM106C-220ENST00000552561 CLASP1Q7Z460 1538 aa8.16□□□□□ -1.1
TMEM106C-220ENST00000552561 RAD54L2Q9Y4B4 1467 aa8.16□□□□□ -1.1
TMEM106C-220ENST00000552561 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
TMEM106C-220ENST00000552561 GRIN2BQ13224 1484 aa8.14□□□□□ -1.11
TMEM106C-220ENST00000552561 SYNJ2O15056 1496 aa8.13□□□□□ -1.11
TMEM106C-220ENST00000552561 TDRD9Q8NDG6 1382 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-220ENST00000552561 SNAPC4Q5SXM2 1469 aa8.13□□□□□ -1.11
TMEM106C-220ENST00000552561 ABCA5Q8WWZ7 1642 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms