RNA–Protein interactions for RNA: ENST00000489828.5

SRPK2-214, Transcript of SRSF protein kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRPK2, Length 2,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-214ENST00000489828 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
SRPK2-214ENST00000489828 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
SRPK2-214ENST00000489828 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
SRPK2-214ENST00000489828 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
SRPK2-214ENST00000489828 DCAF8L2P0C7V8 631 aa15.43■□□□□ 0.06
SRPK2-214ENST00000489828 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
SRPK2-214ENST00000489828 SUPT5HO00267 1087 aaKnown RBP15.27■□□□□ 0.03
SRPK2-214ENST00000489828 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
SRPK2-214ENST00000489828 ABCC9O60706 1549 aa14.99□□□□□ -0.01
SRPK2-214ENST00000489828 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
SRPK2-214ENST00000489828 NACADO15069 1562 aa14.85□□□□□ -0.03
SRPK2-214ENST00000489828 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.04
SRPK2-214ENST00000489828 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
SRPK2-214ENST00000489828 RB1CC1Q8TDY2 1594 aa14.65□□□□□ -0.06
SRPK2-214ENST00000489828 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
SRPK2-214ENST00000489828 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
SRPK2-214ENST00000489828 UNC13AQ9UPW8 1703 aa14.45□□□□□ -0.1
SRPK2-214ENST00000489828 WIZO95785 1651 aa14.42□□□□□ -0.1
SRPK2-214ENST00000489828 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
SRPK2-214ENST00000489828 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
SRPK2-214ENST00000489828 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
SRPK2-214ENST00000489828 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
SRPK2-214ENST00000489828 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
SRPK2-214ENST00000489828 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.14
SRPK2-214ENST00000489828 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
SRPK2-214ENST00000489828 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
SRPK2-214ENST00000489828 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
SRPK2-214ENST00000489828 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
SRPK2-214ENST00000489828 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
SRPK2-214ENST00000489828 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
SRPK2-214ENST00000489828 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
SRPK2-214ENST00000489828 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
SRPK2-214ENST00000489828 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
SRPK2-214ENST00000489828 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
SRPK2-214ENST00000489828 HRCP23327 699 aa13.94□□□□□ -0.18
SRPK2-214ENST00000489828 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
SRPK2-214ENST00000489828 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
SRPK2-214ENST00000489828 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
SRPK2-214ENST00000489828 MYT1Q01538 1121 aa13.88□□□□□ -0.19
SRPK2-214ENST00000489828 SOGA1O94964 1423 aa13.8□□□□□ -0.2
SRPK2-214ENST00000489828 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
SRPK2-214ENST00000489828 EEA1Q15075 1411 aa13.75□□□□□ -0.21
SRPK2-214ENST00000489828 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
SRPK2-214ENST00000489828 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
SRPK2-214ENST00000489828 HMGXB3Q12766 1538 aa13.73□□□□□ -0.21
SRPK2-214ENST00000489828 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
SRPK2-214ENST00000489828 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.22
SRPK2-214ENST00000489828 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
SRPK2-214ENST00000489828 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
SRPK2-214ENST00000489828 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
SRPK2-214ENST00000489828 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
SRPK2-214ENST00000489828 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
SRPK2-214ENST00000489828 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
SRPK2-214ENST00000489828 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
SRPK2-214ENST00000489828 KIF21BO75037 1637 aa13.59□□□□□ -0.23
SRPK2-214ENST00000489828 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
SRPK2-214ENST00000489828 CFTRP13569 1480 aa13.55□□□□□ -0.24
SRPK2-214ENST00000489828 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
SRPK2-214ENST00000489828 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.24
SRPK2-214ENST00000489828 CUX1P39880 1505 aa13.51□□□□□ -0.25
SRPK2-214ENST00000489828 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
SRPK2-214ENST00000489828 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
SRPK2-214ENST00000489828 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
SRPK2-214ENST00000489828 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
SRPK2-214ENST00000489828 CLIP1P30622 1438 aa13.45□□□□□ -0.26
SRPK2-214ENST00000489828 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
SRPK2-214ENST00000489828 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
SRPK2-214ENST00000489828 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
SRPK2-214ENST00000489828 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
SRPK2-214ENST00000489828 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
SRPK2-214ENST00000489828 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
SRPK2-214ENST00000489828 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
SRPK2-214ENST00000489828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
SRPK2-214ENST00000489828 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
SRPK2-214ENST00000489828 CUX2O14529 1486 aa13.3□□□□□ -0.28
SRPK2-214ENST00000489828 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
SRPK2-214ENST00000489828 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
SRPK2-214ENST00000489828 APLP2Q06481 763 aa13.27□□□□□ -0.29
SRPK2-214ENST00000489828 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
SRPK2-214ENST00000489828 NESP48681 1621 aa13.26□□□□□ -0.29
SRPK2-214ENST00000489828 IGF1RP08069 1367 aa13.25□□□□□ -0.29
SRPK2-214ENST00000489828 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
SRPK2-214ENST00000489828 TOPBP1Q92547 1522 aa13.2□□□□□ -0.3
SRPK2-214ENST00000489828 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
SRPK2-214ENST00000489828 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
SRPK2-214ENST00000489828 CARMIL1Q5VZK9 1371 aa13.19□□□□□ -0.3
SRPK2-214ENST00000489828 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
SRPK2-214ENST00000489828 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
SRPK2-214ENST00000489828 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
SRPK2-214ENST00000489828 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
SRPK2-214ENST00000489828 URB2Q14146 1524 aaKnown RBP13.12□□□□□ -0.31
SRPK2-214ENST00000489828 KANK4Q5T7N3 995 aaPredicted RBP13.12□□□□□ -0.31
SRPK2-214ENST00000489828 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
SRPK2-214ENST00000489828 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
SRPK2-214ENST00000489828 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SRPK2-214ENST00000489828 CUL7Q14999 1698 aa13.08□□□□□ -0.32
SRPK2-214ENST00000489828 KIF21AQ7Z4S6 1674 aa13.07□□□□□ -0.32
SRPK2-214ENST00000489828 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
SRPK2-214ENST00000489828 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
SRPK2-214ENST00000489828 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms