RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
TMEM106C-208ENST00000548355 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
TMEM106C-208ENST00000548355 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
TMEM106C-208ENST00000548355 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
TMEM106C-208ENST00000548355 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
TMEM106C-208ENST00000548355 ABCC9O60706 1549 aa14.51□□□□□ -0.09
TMEM106C-208ENST00000548355 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
TMEM106C-208ENST00000548355 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
TMEM106C-208ENST00000548355 NACADO15069 1562 aa14.3□□□□□ -0.12
TMEM106C-208ENST00000548355 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
TMEM106C-208ENST00000548355 SCRIBQ14160 1630 aa14.12□□□□□ -0.15
TMEM106C-208ENST00000548355 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
TMEM106C-208ENST00000548355 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
TMEM106C-208ENST00000548355 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.22
TMEM106C-208ENST00000548355 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM106C-208ENST00000548355 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
TMEM106C-208ENST00000548355 CECR2Q9BXF3 1484 aa13.66□□□□□ -0.22
TMEM106C-208ENST00000548355 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
TMEM106C-208ENST00000548355 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.23
TMEM106C-208ENST00000548355 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
TMEM106C-208ENST00000548355 WIZO95785 1651 aa13.47□□□□□ -0.25
TMEM106C-208ENST00000548355 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
TMEM106C-208ENST00000548355 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
TMEM106C-208ENST00000548355 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
TMEM106C-208ENST00000548355 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
TMEM106C-208ENST00000548355 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
TMEM106C-208ENST00000548355 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
TMEM106C-208ENST00000548355 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
TMEM106C-208ENST00000548355 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
TMEM106C-208ENST00000548355 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
TMEM106C-208ENST00000548355 HMGXB3Q12766 1538 aa13.17□□□□□ -0.3
TMEM106C-208ENST00000548355 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
TMEM106C-208ENST00000548355 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
TMEM106C-208ENST00000548355 ABCC8Q09428 1581 aa12.93□□□□□ -0.34
TMEM106C-208ENST00000548355 CFTRP13569 1480 aa12.9□□□□□ -0.34
TMEM106C-208ENST00000548355 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
TMEM106C-208ENST00000548355 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
TMEM106C-208ENST00000548355 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
TMEM106C-208ENST00000548355 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
TMEM106C-208ENST00000548355 SYNJ1O43426 1573 aa12.79□□□□□ -0.36
TMEM106C-208ENST00000548355 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
TMEM106C-208ENST00000548355 TOP2BQ02880 1626 aa12.75□□□□□ -0.37
TMEM106C-208ENST00000548355 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
TMEM106C-208ENST00000548355 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
TMEM106C-208ENST00000548355 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
TMEM106C-208ENST00000548355 NESP48681 1621 aa12.72□□□□□ -0.37
TMEM106C-208ENST00000548355 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
TMEM106C-208ENST00000548355 EEA1Q15075 1411 aa12.71□□□□□ -0.37
TMEM106C-208ENST00000548355 CUX1P39880 1505 aa12.71□□□□□ -0.38
TMEM106C-208ENST00000548355 SOGA1O94964 1423 aa12.71□□□□□ -0.38
TMEM106C-208ENST00000548355 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
TMEM106C-208ENST00000548355 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
TMEM106C-208ENST00000548355 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
TMEM106C-208ENST00000548355 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
TMEM106C-208ENST00000548355 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
TMEM106C-208ENST00000548355 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
TMEM106C-208ENST00000548355 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
TMEM106C-208ENST00000548355 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
TMEM106C-208ENST00000548355 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
TMEM106C-208ENST00000548355 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
TMEM106C-208ENST00000548355 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
TMEM106C-208ENST00000548355 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
TMEM106C-208ENST00000548355 KIF21BO75037 1637 aa12.52□□□□□ -0.4
TMEM106C-208ENST00000548355 CUX2O14529 1486 aa12.51□□□□□ -0.41
TMEM106C-208ENST00000548355 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-208ENST00000548355 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
TMEM106C-208ENST00000548355 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
TMEM106C-208ENST00000548355 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
TMEM106C-208ENST00000548355 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
TMEM106C-208ENST00000548355 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
TMEM106C-208ENST00000548355 ERCC6Q03468 1493 aa12.46□□□□□ -0.42
TMEM106C-208ENST00000548355 PRXQ9BXM0 1461 aa12.45□□□□□ -0.42
TMEM106C-208ENST00000548355 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
TMEM106C-208ENST00000548355 RAPGEF2Q9Y4G8 1499 aa12.44□□□□□ -0.42
TMEM106C-208ENST00000548355 CEP162Q5TB80 1403 aa12.42□□□□□ -0.42
TMEM106C-208ENST00000548355 IGF1RP08069 1367 aa12.42□□□□□ -0.42
TMEM106C-208ENST00000548355 WDR62O43379 1518 aa12.41□□□□□ -0.42
TMEM106C-208ENST00000548355 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
TMEM106C-208ENST00000548355 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
TMEM106C-208ENST00000548355 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
TMEM106C-208ENST00000548355 TDRD9Q8NDG6 1382 aaKnown RBP12.36□□□□□ -0.43
TMEM106C-208ENST00000548355 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
TMEM106C-208ENST00000548355 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
TMEM106C-208ENST00000548355 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
TMEM106C-208ENST00000548355 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
TMEM106C-208ENST00000548355 CUL7Q14999 1698 aa12.33□□□□□ -0.44
TMEM106C-208ENST00000548355 CLIP1P30622 1438 aa12.33□□□□□ -0.44
TMEM106C-208ENST00000548355 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
TMEM106C-208ENST00000548355 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.456e-6■■■■□ 25.1
TMEM106C-208ENST00000548355 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
TMEM106C-208ENST00000548355 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
TMEM106C-208ENST00000548355 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
TMEM106C-208ENST00000548355 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
TMEM106C-208ENST00000548355 VPS8Q8N3P4 1428 aa12.22□□□□□ -0.45
TMEM106C-208ENST00000548355 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
TMEM106C-208ENST00000548355 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
TMEM106C-208ENST00000548355 PCGF6Q9BYE7 350 aa12.2□□□□□ -0.46
TMEM106C-208ENST00000548355 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
TMEM106C-208ENST00000548355 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
TMEM106C-208ENST00000548355 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms