RNA–Protein interactions for RNA: ENST00000546902.5

ACTR6-202, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 2 BASIC

Gene ACTR6, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-202ENST00000546902 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
ACTR6-202ENST00000546902 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
ACTR6-202ENST00000546902 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
ACTR6-202ENST00000546902 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
ACTR6-202ENST00000546902 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
ACTR6-202ENST00000546902 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
ACTR6-202ENST00000546902 FOXD1Q16676 465 aa16.51■□□□□ 0.23
ACTR6-202ENST00000546902 MSH5O43196 834 aa16.03■□□□□ 0.16
ACTR6-202ENST00000546902 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
ACTR6-202ENST00000546902 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
ACTR6-202ENST00000546902 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
ACTR6-202ENST00000546902 MYT1Q01538 1121 aa15.14■□□□□ 0.01
ACTR6-202ENST00000546902 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
ACTR6-202ENST00000546902 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
ACTR6-202ENST00000546902 ADRA2BP18089 450 aa14.67□□□□□ -0.06
ACTR6-202ENST00000546902 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
ACTR6-202ENST00000546902 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
ACTR6-202ENST00000546902 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
ACTR6-202ENST00000546902 ABCC9O60706 1549 aa14.45□□□□□ -0.1
ACTR6-202ENST00000546902 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
ACTR6-202ENST00000546902 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
ACTR6-202ENST00000546902 NACADO15069 1562 aa14.21□□□□□ -0.13
ACTR6-202ENST00000546902 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
ACTR6-202ENST00000546902 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
ACTR6-202ENST00000546902 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
ACTR6-202ENST00000546902 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
ACTR6-202ENST00000546902 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
ACTR6-202ENST00000546902 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
ACTR6-202ENST00000546902 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
ACTR6-202ENST00000546902 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
ACTR6-202ENST00000546902 HRCP23327 699 aa13.83□□□□□ -0.2
ACTR6-202ENST00000546902 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
ACTR6-202ENST00000546902 SLC24A1O60721 1099 aa13.78□□□□□ -0.2
ACTR6-202ENST00000546902 APLP2Q06481 763 aa13.78□□□□□ -0.2
ACTR6-202ENST00000546902 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
ACTR6-202ENST00000546902 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
ACTR6-202ENST00000546902 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
ACTR6-202ENST00000546902 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
ACTR6-202ENST00000546902 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
ACTR6-202ENST00000546902 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
ACTR6-202ENST00000546902 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
ACTR6-202ENST00000546902 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
ACTR6-202ENST00000546902 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
ACTR6-202ENST00000546902 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.26
ACTR6-202ENST00000546902 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
ACTR6-202ENST00000546902 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
ACTR6-202ENST00000546902 WIZO95785 1651 aa13.37□□□□□ -0.27
ACTR6-202ENST00000546902 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.27
ACTR6-202ENST00000546902 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
ACTR6-202ENST00000546902 PEG3Q9GZU2 1588 aa13.29□□□□□ -0.28
ACTR6-202ENST00000546902 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.28
ACTR6-202ENST00000546902 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.28
ACTR6-202ENST00000546902 CENPBP07199 599 aaPredicted RBP13.24□□□□□ -0.29
ACTR6-202ENST00000546902 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
ACTR6-202ENST00000546902 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
ACTR6-202ENST00000546902 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
ACTR6-202ENST00000546902 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
ACTR6-202ENST00000546902 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
ACTR6-202ENST00000546902 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
ACTR6-202ENST00000546902 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
ACTR6-202ENST00000546902 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
ACTR6-202ENST00000546902 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
ACTR6-202ENST00000546902 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
ACTR6-202ENST00000546902 POTEHQ6S545 545 aa13.07□□□□□ -0.32
ACTR6-202ENST00000546902 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
ACTR6-202ENST00000546902 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
ACTR6-202ENST00000546902 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
ACTR6-202ENST00000546902 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
ACTR6-202ENST00000546902 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
ACTR6-202ENST00000546902 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
ACTR6-202ENST00000546902 CFTRP13569 1480 aa12.82□□□□□ -0.36
ACTR6-202ENST00000546902 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
ACTR6-202ENST00000546902 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
ACTR6-202ENST00000546902 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.36
ACTR6-202ENST00000546902 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
ACTR6-202ENST00000546902 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
ACTR6-202ENST00000546902 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
ACTR6-202ENST00000546902 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
ACTR6-202ENST00000546902 NEUROD1Q13562 356 aa12.75□□□□□ -0.37
ACTR6-202ENST00000546902 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
ACTR6-202ENST00000546902 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
ACTR6-202ENST00000546902 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.37
ACTR6-202ENST00000546902 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
ACTR6-202ENST00000546902 NESP48681 1621 aa12.68□□□□□ -0.38
ACTR6-202ENST00000546902 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
ACTR6-202ENST00000546902 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
ACTR6-202ENST00000546902 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
ACTR6-202ENST00000546902 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
ACTR6-202ENST00000546902 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
ACTR6-202ENST00000546902 CUX1P39880 1505 aa12.62□□□□□ -0.39
ACTR6-202ENST00000546902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■□□□ 12.6
ACTR6-202ENST00000546902 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
ACTR6-202ENST00000546902 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
ACTR6-202ENST00000546902 SOGA1O94964 1423 aa12.54□□□□□ -0.4
ACTR6-202ENST00000546902 KIF21AQ7Z4S6 1674 aa12.53□□□□□ -0.4
ACTR6-202ENST00000546902 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
ACTR6-202ENST00000546902 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
ACTR6-202ENST00000546902 EEA1Q15075 1411 aa12.5□□□□□ -0.41
ACTR6-202ENST00000546902 TOPBP1Q92547 1522 aa12.5□□□□□ -0.41
ACTR6-202ENST00000546902 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms