RNA–Protein interactions for RNA: ENST00000357311.7

SRPK2-201, Transcript of SRSF protein kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRPK2, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-201ENST00000357311 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
SRPK2-201ENST00000357311 DCAF8L2P0C7V8 631 aa10.63□□□□□ -0.71
SRPK2-201ENST00000357311 ABCC9O60706 1549 aa10.5□□□□□ -0.73
SRPK2-201ENST00000357311 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
SRPK2-201ENST00000357311 RB1CC1Q8TDY2 1594 aa10.02□□□□□ -0.81
SRPK2-201ENST00000357311 NACADO15069 1562 aa9.97□□□□□ -0.81
SRPK2-201ENST00000357311 PABPN1Q86U42 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
SRPK2-201ENST00000357311 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
SRPK2-201ENST00000357311 SHROOM4Q9ULL8 1493 aa9.81□□□□□ -0.84
SRPK2-201ENST00000357311 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
SRPK2-201ENST00000357311 DCAF1Q9Y4B6 1507 aa9.76□□□□□ -0.85
SRPK2-201ENST00000357311 SCRIBQ14160 1630 aa9.71□□□□□ -0.86
SRPK2-201ENST00000357311 DNAJC5BQ9UF47 199 aa9.43□□□□□ -0.9
SRPK2-201ENST00000357311 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
SRPK2-201ENST00000357311 CECR2Q9BXF3 1484 aa9.42□□□□□ -0.9
SRPK2-201ENST00000357311 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
SRPK2-201ENST00000357311 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
SRPK2-201ENST00000357311 UNC13AQ9UPW8 1703 aa9.35□□□□□ -0.91
SRPK2-201ENST00000357311 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
SRPK2-201ENST00000357311 CC2D2AQ9P2K1 1620 aa9.29□□□□□ -0.92
SRPK2-201ENST00000357311 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
SRPK2-201ENST00000357311 SMARCA2P51531 1590 aa9.28□□□□□ -0.92
SRPK2-201ENST00000357311 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
SRPK2-201ENST00000357311 ATAD2BQ9ULI0 1458 aa9.22□□□□□ -0.93
SRPK2-201ENST00000357311 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
SRPK2-201ENST00000357311 SMARCA4P51532 1647 aa9.18□□□□□ -0.94
SRPK2-201ENST00000357311 MROH2BQ7Z745 1585 aa9.15□□□□□ -0.94
SRPK2-201ENST00000357311 RSF1Q96T23 1441 aaPredicted RBP9.14□□□□□ -0.95
SRPK2-201ENST00000357311 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
SRPK2-201ENST00000357311 HMGXB3Q12766 1538 aa9.09□□□□□ -0.95
SRPK2-201ENST00000357311 CADPSQ9ULU8 1353 aa9.06□□□□□ -0.96
SRPK2-201ENST00000357311 WIZO95785 1651 aa9.01□□□□□ -0.97
SRPK2-201ENST00000357311 TOP2AP11388 1531 aaKnown RBP9□□□□□ -0.97
SRPK2-201ENST00000357311 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
SRPK2-201ENST00000357311 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
SRPK2-201ENST00000357311 FBLN2P98095 1184 aa8.96□□□□□ -0.98
SRPK2-201ENST00000357311 NESP48681 1621 aa8.95□□□□□ -0.98
SRPK2-201ENST00000357311 LAMC3Q9Y6N6 1575 aa8.94□□□□□ -0.98
SRPK2-201ENST00000357311 CCDC88BA6NC98 1476 aa8.93□□□□□ -0.98
SRPK2-201ENST00000357311 FANCD2Q9BXW9 1451 aa8.93□□□□□ -0.98
SRPK2-201ENST00000357311 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
SRPK2-201ENST00000357311 TRIM41Q8WV44 630 aa8.9□□□□□ -0.98
SRPK2-201ENST00000357311 MRC2Q9UBG0 1479 aa8.88□□□□□ -0.99
SRPK2-201ENST00000357311 CFTRP13569 1480 aa8.88□□□□□ -0.99
SRPK2-201ENST00000357311 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
SRPK2-201ENST00000357311 CUX2O14529 1486 aa8.86□□□□□ -0.99
SRPK2-201ENST00000357311 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
SRPK2-201ENST00000357311 OSCARQ8IYS5 282 aa8.79□□□□□ -1
SRPK2-201ENST00000357311 SOGA1O94964 1423 aa8.79□□□□□ -1
SRPK2-201ENST00000357311 WRNQ14191 1432 aaPredicted RBP eCLIP8.78□□□□□ -1
SRPK2-201ENST00000357311 IFT140Q96RY7 1462 aa8.74□□□□□ -1.01
SRPK2-201ENST00000357311 TDRD9Q8NDG6 1382 aaKnown RBP8.74□□□□□ -1.01
SRPK2-201ENST00000357311 TOPBP1Q92547 1522 aa8.72□□□□□ -1.01
SRPK2-201ENST00000357311 TTBK1Q5TCY1 1321 aaPredicted RBP8.71□□□□□ -1.01
SRPK2-201ENST00000357311 EHMT2Q96KQ7 1210 aa8.71□□□□□ -1.01
SRPK2-201ENST00000357311 KIF21AQ7Z4S6 1674 aa8.69□□□□□ -1.02
SRPK2-201ENST00000357311 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
SRPK2-201ENST00000357311 URB2Q14146 1524 aaKnown RBP8.68□□□□□ -1.02
SRPK2-201ENST00000357311 NPM1P06748 294 aaKnown RBP eCLIP8.68□□□□□ -1.02
SRPK2-201ENST00000357311 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
SRPK2-201ENST00000357311 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
SRPK2-201ENST00000357311 WDR62O43379 1518 aa8.67□□□□□ -1.02
SRPK2-201ENST00000357311 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
SRPK2-201ENST00000357311 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
SRPK2-201ENST00000357311 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
SRPK2-201ENST00000357311 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■■■□ 22.4
SRPK2-201ENST00000357311 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
SRPK2-201ENST00000357311 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
SRPK2-201ENST00000357311 GAPVD1Q14C86 1478 aa8.63□□□□□ -1.03
SRPK2-201ENST00000357311 GRIN2BQ13224 1484 aa8.63□□□□□ -1.03
SRPK2-201ENST00000357311 THOC2Q8NI27 1593 aaKnown RBP8.62□□□□□ -1.03
SRPK2-201ENST00000357311 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
SRPK2-201ENST00000357311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
SRPK2-201ENST00000357311 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
SRPK2-201ENST00000357311 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
SRPK2-201ENST00000357311 CYB5RLQ6IPT4 315 aa8.6□□□□□ -1.03
SRPK2-201ENST00000357311 CSRNP3Q8WYN3 585 aa8.59□□□□□ -1.03
SRPK2-201ENST00000357311 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
SRPK2-201ENST00000357311 CUX1P39880 1505 aa8.58□□□□□ -1.04
SRPK2-201ENST00000357311 ZNF608Q9ULD9 1512 aaPredicted RBP8.58□□□□□ -1.04
SRPK2-201ENST00000357311 CARMIL1Q5VZK9 1371 aa8.56□□□□□ -1.04
SRPK2-201ENST00000357311 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
SRPK2-201ENST00000357311 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
SRPK2-201ENST00000357311 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
SRPK2-201ENST00000357311 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
SRPK2-201ENST00000357311 APLP2Q06481 763 aa8.54□□□□□ -1.04
SRPK2-201ENST00000357311 ABCA10Q8WWZ4 1543 aa8.53□□□□□ -1.04
SRPK2-201ENST00000357311 JPH4Q96JJ6 628 aa8.53□□□□□ -1.04
SRPK2-201ENST00000357311 EEA1Q15075 1411 aa8.52□□□□□ -1.05
SRPK2-201ENST00000357311 SYNJ2O15056 1496 aa8.52□□□□□ -1.05
SRPK2-201ENST00000357311 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
SRPK2-201ENST00000357311 TOP2BQ02880 1626 aa8.52□□□□□ -1.05
SRPK2-201ENST00000357311 P3H3Q8IVL6 736 aa8.49□□□□□ -1.05
SRPK2-201ENST00000357311 SYNJ1O43426 1573 aa8.49□□□□□ -1.05
SRPK2-201ENST00000357311 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
SRPK2-201ENST00000357311 IGF1RP08069 1367 aa8.47□□□□□ -1.05
SRPK2-201ENST00000357311 WDR97A6NE52 1622 aa8.46□□□□□ -1.05
SRPK2-201ENST00000357311 RAPGEF2Q9Y4G8 1499 aa8.45□□□□□ -1.06
SRPK2-201ENST00000357311 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
SRPK2-201ENST00000357311 ERICH3Q5RHP9 1530 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms