Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCH2Q9Y6C5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.39■■□□□ 1.34
PTCH2Q9Y6C5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCH2Q9Y6C5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 KRT18P57-201ENST00000443599 1254 ntBASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTCH2Q9Y6C5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 KRT8P9-201ENST00000558927 1449 ntBASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.38■■□□□ 1.33
PTCH2Q9Y6C5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTCH2Q9Y6C5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 AF186192.3-201ENST00000583427 947 ntBASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTCH2Q9Y6C5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 AC087633.2-202ENST00000565166 1439 ntBASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.35■■□□□ 1.33
PTCH2Q9Y6C5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 AC113347.1-201ENST00000413321 391 ntBASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCH2Q9Y6C5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 FAM197Y1-201ENST00000421178 764 ntBASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms