RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 NISCHQ9Y2I1 1504 aa49.21■■■■■ 5.47
CDK5-204ENST00000485972 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
CDK5-204ENST00000485972 ZCCHC6Q5VYS8 1495 aaKnown RBP41.31■■■■■ 4.2
CDK5-204ENST00000485972 DCAF8L2P0C7V8 631 aa40.81■■■■■ 4.12
CDK5-204ENST00000485972 ABCC9O60706 1549 aa40.65■■■■■ 4.1
CDK5-204ENST00000485972 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
CDK5-204ENST00000485972 SHROOM4Q9ULL8 1493 aa40.22■■■■■ 4.03
CDK5-204ENST00000485972 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
CDK5-204ENST00000485972 NACADO15069 1562 aa39.95■■■■□ 3.99
CDK5-204ENST00000485972 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
CDK5-204ENST00000485972 SCRIBQ14160 1630 aa39.46■■■■□ 3.91
CDK5-204ENST00000485972 SUPT5HO00267 1087 aaKnown RBP38.72■■■■□ 3.79
CDK5-204ENST00000485972 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
CDK5-204ENST00000485972 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
CDK5-204ENST00000485972 BICRAQ9NZM4 1560 aa38.41■■■■□ 3.74
CDK5-204ENST00000485972 CECR2Q9BXF3 1484 aa38.27■■■■□ 3.72
CDK5-204ENST00000485972 RSF1Q96T23 1441 aaPredicted RBP38.2■■■■□ 3.71
CDK5-204ENST00000485972 MROH2BQ7Z745 1585 aa38.02■■■■□ 3.68
CDK5-204ENST00000485972 BAZ1AQ9NRL2 1556 aaPredicted RBP37.99■■■■□ 3.67
CDK5-204ENST00000485972 SMARCA4P51532 1647 aa37.79■■■■□ 3.64
CDK5-204ENST00000485972 WIZO95785 1651 aa37.67■■■■□ 3.62
CDK5-204ENST00000485972 PEG3Q9GZU2 1588 aa37.32■■■■□ 3.56
CDK5-204ENST00000485972 TOP2AP11388 1531 aaKnown RBP37.29■■■■□ 3.56
CDK5-204ENST00000485972 EIF4G1Q04637 1599 aaKnown RBP37.27■■■■□ 3.56
CDK5-204ENST00000485972 ATAD2BQ9ULI0 1458 aa37.24■■■■□ 3.55
CDK5-204ENST00000485972 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
CDK5-204ENST00000485972 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
CDK5-204ENST00000485972 CHIC1Q5VXU3 224 aa37.02■■■■□ 3.52
CDK5-204ENST00000485972 CCDC88BA6NC98 1476 aa36.96■■■■□ 3.51
CDK5-204ENST00000485972 NCAPD3P42695 1498 aa36.92■■■■□ 3.5
CDK5-204ENST00000485972 HMGXB3Q12766 1538 aa36.81■■■■□ 3.48
CDK5-204ENST00000485972 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
CDK5-204ENST00000485972 TRIM41Q8WV44 630 aa36.41■■■■□ 3.42
CDK5-204ENST00000485972 ABCC8Q09428 1581 aa36.15■■■■□ 3.38
CDK5-204ENST00000485972 CFTRP13569 1480 aa36.09■■■■□ 3.37
CDK5-204ENST00000485972 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.35
CDK5-204ENST00000485972 WRNQ14191 1432 aaPredicted RBP eCLIP35.96■■■■□ 3.35
CDK5-204ENST00000485972 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
CDK5-204ENST00000485972 FAM9AQ8IZU1 332 aaPredicted RBP35.76■■■■□ 3.31
CDK5-204ENST00000485972 SYNJ1O43426 1573 aa35.76■■■■□ 3.31
CDK5-204ENST00000485972 PRDM2Q13029 1718 aa35.73■■■■□ 3.31
CDK5-204ENST00000485972 NESP48681 1621 aa35.67■■■■□ 3.3
CDK5-204ENST00000485972 LOC105371045A0A1W2PR82 267 aa35.64■■■■□ 3.3
CDK5-204ENST00000485972 LAMC3Q9Y6N6 1575 aa35.62■■■■□ 3.29
CDK5-204ENST00000485972 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
CDK5-204ENST00000485972 FANCD2Q9BXW9 1451 aa35.58■■■■□ 3.29
CDK5-204ENST00000485972 CUX1P39880 1505 aa35.55■■■■□ 3.28
CDK5-204ENST00000485972 BIVM-ERCC5R4GMW8 1640 aa35.53■■■■□ 3.28
CDK5-204ENST00000485972 SOGA1O94964 1423 aa35.52■■■■□ 3.28
CDK5-204ENST00000485972 EEA1Q15075 1411 aa35.43■■■■□ 3.26
CDK5-204ENST00000485972 PDS5BQ9NTI5 1447 aa35.43■■■■□ 3.26
CDK5-204ENST00000485972 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
CDK5-204ENST00000485972 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
CDK5-204ENST00000485972 CSRNP3Q8WYN3 585 aa35.3■■■■□ 3.24
CDK5-204ENST00000485972 EHMT2Q96KQ7 1210 aa35.28■■■■□ 3.24
CDK5-204ENST00000485972 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
CDK5-204ENST00000485972 FGD5Q6ZNL6 1462 aa35.17■■■■□ 3.22
CDK5-204ENST00000485972 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
CDK5-204ENST00000485972 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
CDK5-204ENST00000485972 URB2Q14146 1524 aaKnown RBP35.12■■■■□ 3.21
CDK5-204ENST00000485972 KIF27Q86VH2 1401 aa35.07■■■■□ 3.2
CDK5-204ENST00000485972 POLA1P09884 1462 aaPredicted RBP35.01■■■■□ 3.2
CDK5-204ENST00000485972 CUX2O14529 1486 aa34.98■■■■□ 3.19
CDK5-204ENST00000485972 GOLGA3Q08378 1498 aa34.93■■■■□ 3.18
CDK5-204ENST00000485972 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
CDK5-204ENST00000485972 RAD54L2Q9Y4B4 1467 aa34.93■■■■□ 3.18
CDK5-204ENST00000485972 KIF21BO75037 1637 aa34.9■■■■□ 3.18
CDK5-204ENST00000485972 UBTFP17480 764 aaKnown RBP34.87■■■■□ 3.17
CDK5-204ENST00000485972 ERCC6Q03468 1493 aa34.87■■■■□ 3.17
CDK5-204ENST00000485972 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
CDK5-204ENST00000485972 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
CDK5-204ENST00000485972 PRXQ9BXM0 1461 aa34.8■■■■□ 3.16
CDK5-204ENST00000485972 RAPGEF2Q9Y4G8 1499 aa34.78■■■■□ 3.16
CDK5-204ENST00000485972 IGF1RP08069 1367 aa34.78■■■■□ 3.16
CDK5-204ENST00000485972 WDR62O43379 1518 aa34.71■■■■□ 3.15
CDK5-204ENST00000485972 ERICH3Q5RHP9 1530 aa34.69■■■■□ 3.14
CDK5-204ENST00000485972 CEP162Q5TB80 1403 aa34.65■■■■□ 3.14
CDK5-204ENST00000485972 WDR97A6NE52 1622 aa34.64■■■■□ 3.14
CDK5-204ENST00000485972 TDRD9Q8NDG6 1382 aaKnown RBP34.63■■■■□ 3.13
CDK5-204ENST00000485972 TARBP1Q13395 1621 aaKnown RBP34.61■■■■□ 3.13
CDK5-204ENST00000485972 CARMIL1Q5VZK9 1371 aa34.6■■■■□ 3.13
CDK5-204ENST00000485972 THOC2Q8NI27 1593 aaKnown RBP34.58■■■■□ 3.13
CDK5-204ENST00000485972 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
CDK5-204ENST00000485972 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
CDK5-204ENST00000485972 IFT140Q96RY7 1462 aa34.52■■■■□ 3.12
CDK5-204ENST00000485972 CLIP1P30622 1438 aa34.4■■■■□ 3.1
CDK5-204ENST00000485972 CUL7Q14999 1698 aa34.4■■■■□ 3.1
CDK5-204ENST00000485972 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
CDK5-204ENST00000485972 RANGAP1P46060 587 aaPredicted RBP34.34■■■■□ 3.09
CDK5-204ENST00000485972 ZNF608Q9ULD9 1512 aaPredicted RBP34.34■■■■□ 3.09
CDK5-204ENST00000485972 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
CDK5-204ENST00000485972 PBRM1Q86U86 1689 aa34.22■■■■□ 3.07
CDK5-204ENST00000485972 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
CDK5-204ENST00000485972 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
CDK5-204ENST00000485972 ADAMTS12P58397 1594 aa34.09■■■■□ 3.05
CDK5-204ENST00000485972 VPS8Q8N3P4 1428 aa34.08■■■■□ 3.05
CDK5-204ENST00000485972 SNAPC4Q5SXM2 1469 aa34.04■■■■□ 3.04
CDK5-204ENST00000485972 ARHGAP35Q9NRY4 1499 aa34.03■■■■□ 3.04
CDK5-204ENST00000485972 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
CDK5-204ENST00000485972 PPARGC1BQ86YN6 1023 aaKnown RBP33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms