RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 NISCHQ9Y2I1 1504 aa49.08■■■■■ 5.45
PGAM5-204ENST00000543955 CCDC180Q9P1Z9 1646 aa43.24■■■■■ 4.51
PGAM5-204ENST00000543955 ZCCHC6Q5VYS8 1495 aaKnown RBP41.16■■■■■ 4.18
PGAM5-204ENST00000543955 ABCC9O60706 1549 aa41.09■■■■■ 4.17
PGAM5-204ENST00000543955 DCAF1Q9Y4B6 1507 aa40.7■■■■■ 4.11
PGAM5-204ENST00000543955 DCAF8L2P0C7V8 631 aa40.45■■■■■ 4.07
PGAM5-204ENST00000543955 MYO15BQ96JP2 1530 aa40.45■■■■■ 4.07
PGAM5-204ENST00000543955 NACADO15069 1562 aa40.31■■■■■ 4.04
PGAM5-204ENST00000543955 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
PGAM5-204ENST00000543955 SCRIBQ14160 1630 aa39.5■■■■□ 3.91
PGAM5-204ENST00000543955 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
PGAM5-204ENST00000543955 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
PGAM5-204ENST00000543955 BICRAQ9NZM4 1560 aa38.8■■■■□ 3.8
PGAM5-204ENST00000543955 PABPN1Q86U42 306 aaKnown RBP eCLIP38.52■■■■□ 3.76
PGAM5-204ENST00000543955 CECR2Q9BXF3 1484 aa38.06■■■■□ 3.68
PGAM5-204ENST00000543955 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.68
PGAM5-204ENST00000543955 SMARCA4P51532 1647 aa37.9■■■■□ 3.66
PGAM5-204ENST00000543955 MROH2BQ7Z745 1585 aa37.84■■■■□ 3.65
PGAM5-204ENST00000543955 RSF1Q96T23 1441 aaPredicted RBP37.79■■■■□ 3.64
PGAM5-204ENST00000543955 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
PGAM5-204ENST00000543955 SUPT5HO00267 1087 aaKnown RBP37.66■■■■□ 3.62
PGAM5-204ENST00000543955 WIZO95785 1651 aa37.54■■■■□ 3.6
PGAM5-204ENST00000543955 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
PGAM5-204ENST00000543955 SMARCA2P51531 1590 aa37.4■■■■□ 3.58
PGAM5-204ENST00000543955 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
PGAM5-204ENST00000543955 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
PGAM5-204ENST00000543955 TOP2AP11388 1531 aaKnown RBP37.21■■■■□ 3.55
PGAM5-204ENST00000543955 HMGXB3Q12766 1538 aa37.13■■■■□ 3.53
PGAM5-204ENST00000543955 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.53
PGAM5-204ENST00000543955 NCAPD3P42695 1498 aa37.12■■■■□ 3.53
PGAM5-204ENST00000543955 CCDC88BA6NC98 1476 aa36.7■■■■□ 3.47
PGAM5-204ENST00000543955 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
PGAM5-204ENST00000543955 CFTRP13569 1480 aa36.16■■■■□ 3.38
PGAM5-204ENST00000543955 PRDM2Q13029 1718 aa36.15■■■■□ 3.38
PGAM5-204ENST00000543955 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
PGAM5-204ENST00000543955 LAMC3Q9Y6N6 1575 aa36.05■■■■□ 3.36
PGAM5-204ENST00000543955 NESP48681 1621 aa35.89■■■■□ 3.34
PGAM5-204ENST00000543955 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
PGAM5-204ENST00000543955 ABCC8Q09428 1581 aa35.76■■■■□ 3.31
PGAM5-204ENST00000543955 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
PGAM5-204ENST00000543955 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
PGAM5-204ENST00000543955 WRNQ14191 1432 aaPredicted RBP eCLIP35.64■■■■□ 3.3
PGAM5-204ENST00000543955 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
PGAM5-204ENST00000543955 CEP164Q9UPV0 1460 aa35.6■■■■□ 3.29
PGAM5-204ENST00000543955 TRIM41Q8WV44 630 aa35.54■■■■□ 3.28
PGAM5-204ENST00000543955 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
PGAM5-204ENST00000543955 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
PGAM5-204ENST00000543955 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
PGAM5-204ENST00000543955 CUX1P39880 1505 aa35.44■■■■□ 3.26
PGAM5-204ENST00000543955 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
PGAM5-204ENST00000543955 ERCC6Q03468 1493 aa35.37■■■■□ 3.25
PGAM5-204ENST00000543955 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
PGAM5-204ENST00000543955 TOPBP1Q92547 1522 aa35.29■■■■□ 3.24
PGAM5-204ENST00000543955 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
PGAM5-204ENST00000543955 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
PGAM5-204ENST00000543955 WDR62O43379 1518 aa35.16■■■■□ 3.22
PGAM5-204ENST00000543955 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
PGAM5-204ENST00000543955 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
PGAM5-204ENST00000543955 EEA1Q15075 1411 aa34.93■■■■□ 3.18
PGAM5-204ENST00000543955 SOGA1O94964 1423 aa34.92■■■■□ 3.18
PGAM5-204ENST00000543955 WDR97A6NE52 1622 aa34.89■■■■□ 3.18
PGAM5-204ENST00000543955 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
PGAM5-204ENST00000543955 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
PGAM5-204ENST00000543955 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
PGAM5-204ENST00000543955 CUX2O14529 1486 aa34.82■■■■□ 3.16
PGAM5-204ENST00000543955 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
PGAM5-204ENST00000543955 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
PGAM5-204ENST00000543955 IFT140Q96RY7 1462 aa34.78■■■■□ 3.16
PGAM5-204ENST00000543955 FAM9AQ8IZU1 332 aaPredicted RBP34.75■■■■□ 3.15
PGAM5-204ENST00000543955 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
PGAM5-204ENST00000543955 CSRNP3Q8WYN3 585 aa34.62■■■■□ 3.13
PGAM5-204ENST00000543955 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
PGAM5-204ENST00000543955 TDRD9Q8NDG6 1382 aaKnown RBP34.54■■■■□ 3.12
PGAM5-204ENST00000543955 KIF21BO75037 1637 aa34.52■■■■□ 3.12
PGAM5-204ENST00000543955 PBRM1Q86U86 1689 aa34.52■■■■□ 3.12
PGAM5-204ENST00000543955 EIF4G3O43432 1585 aaKnown RBP34.51■■■■□ 3.11
PGAM5-204ENST00000543955 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
PGAM5-204ENST00000543955 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
PGAM5-204ENST00000543955 CUL7Q14999 1698 aa34.46■■■■□ 3.11
PGAM5-204ENST00000543955 IGF1RP08069 1367 aa34.46■■■■□ 3.11
PGAM5-204ENST00000543955 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.12e-6■■■■■ 33.2
PGAM5-204ENST00000543955 PRXQ9BXM0 1461 aa34.42■■■■□ 3.1
PGAM5-204ENST00000543955 GRIN2BQ13224 1484 aa34.39■■■■□ 3.1
PGAM5-204ENST00000543955 GOLGA3Q08378 1498 aa34.38■■■■□ 3.09
PGAM5-204ENST00000543955 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
PGAM5-204ENST00000543955 CARMIL1Q5VZK9 1371 aa34.3■■■■□ 3.08
PGAM5-204ENST00000543955 RAPGEF2Q9Y4G8 1499 aa34.28■■■■□ 3.08
PGAM5-204ENST00000543955 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
PGAM5-204ENST00000543955 MAGI1Q96QZ7 1491 aaPredicted RBP34.21■■■■□ 3.07
PGAM5-204ENST00000543955 EHMT2Q96KQ7 1210 aa34.2■■■■□ 3.07
PGAM5-204ENST00000543955 SNAPC4Q5SXM2 1469 aa34.19■■■■□ 3.06
PGAM5-204ENST00000543955 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
PGAM5-204ENST00000543955 TNIKQ9UKE5 1360 aa34.11■■■■□ 3.05
PGAM5-204ENST00000543955 UBTFP17480 764 aaKnown RBP34.1■■■■□ 3.05
PGAM5-204ENST00000543955 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
PGAM5-204ENST00000543955 CTTNBP2Q8WZ74 1663 aa34.01■■■■□ 3.03
PGAM5-204ENST00000543955 GRIN2AQ12879 1464 aa33.97■■■■□ 3.03
PGAM5-204ENST00000543955 CEP162Q5TB80 1403 aa33.88■■■■□ 3.01
PGAM5-204ENST00000543955 CHD1O14646 1710 aa33.88■■■■□ 3.01
PGAM5-204ENST00000543955 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms