RNA–Protein interactions for RNA: ENST00000340177.9

HRH3-202, Transcript of histamine receptor H3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HRH3, Length 2,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3-202ENST00000340177 NISCHQ9Y2I1 1504 aa49.1■■■■■ 5.45
HRH3-202ENST00000340177 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
HRH3-202ENST00000340177 ZCCHC6Q5VYS8 1495 aaKnown RBP41.38■■■■■ 4.22
HRH3-202ENST00000340177 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
HRH3-202ENST00000340177 DCAF8L2P0C7V8 631 aa40.98■■■■■ 4.15
HRH3-202ENST00000340177 DCAF1Q9Y4B6 1507 aa40.25■■■■■ 4.03
HRH3-202ENST00000340177 SUPT5HO00267 1087 aaKnown RBP40.18■■■■■ 4.02
HRH3-202ENST00000340177 ABCC9O60706 1549 aa39.7■■■■□ 3.95
HRH3-202ENST00000340177 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
HRH3-202ENST00000340177 SCRIBQ14160 1630 aa39.36■■■■□ 3.89
HRH3-202ENST00000340177 NACADO15069 1562 aa39.08■■■■□ 3.85
HRH3-202ENST00000340177 CHIC1Q5VXU3 224 aa38.67■■■■□ 3.78
HRH3-202ENST00000340177 RB1CC1Q8TDY2 1594 aa38.62■■■■□ 3.77
HRH3-202ENST00000340177 RSF1Q96T23 1441 aaPredicted RBP38.57■■■■□ 3.77
HRH3-202ENST00000340177 CECR2Q9BXF3 1484 aa38.39■■■■□ 3.74
HRH3-202ENST00000340177 MROH2BQ7Z745 1585 aa38.16■■■■□ 3.7
HRH3-202ENST00000340177 UNC13AQ9UPW8 1703 aa38.03■■■■□ 3.68
HRH3-202ENST00000340177 WIZO95785 1651 aa37.9■■■■□ 3.66
HRH3-202ENST00000340177 PABPN1Q86U42 306 aaKnown RBP eCLIP37.83■■■■□ 3.65
HRH3-202ENST00000340177 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.63
HRH3-202ENST00000340177 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
HRH3-202ENST00000340177 SMARCA4P51532 1647 aa37.55■■■■□ 3.6
HRH3-202ENST00000340177 LOC105371045A0A1W2PR82 267 aa37.53■■■■□ 3.6
HRH3-202ENST00000340177 TRIM41Q8WV44 630 aa37.45■■■■□ 3.59
HRH3-202ENST00000340177 TOP2AP11388 1531 aaKnown RBP37.28■■■■□ 3.56
HRH3-202ENST00000340177 FAM9AQ8IZU1 332 aaPredicted RBP37.17■■■■□ 3.54
HRH3-202ENST00000340177 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.53
HRH3-202ENST00000340177 SMARCA2P51531 1590 aa37.06■■■■□ 3.52
HRH3-202ENST00000340177 EIF4G1Q04637 1599 aaKnown RBP37.03■■■■□ 3.52
HRH3-202ENST00000340177 EHMT2Q96KQ7 1210 aa36.91■■■■□ 3.5
HRH3-202ENST00000340177 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
HRH3-202ENST00000340177 ABCC8Q09428 1581 aa36.8■■■■□ 3.48
HRH3-202ENST00000340177 ATAD2BQ9ULI0 1458 aa36.79■■■■□ 3.48
HRH3-202ENST00000340177 PCGF6Q9BYE7 350 aa36.69■■■■□ 3.46
HRH3-202ENST00000340177 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
HRH3-202ENST00000340177 SOGA1O94964 1423 aa36.31■■■■□ 3.4
HRH3-202ENST00000340177 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
HRH3-202ENST00000340177 NCAPD3P42695 1498 aa36.19■■■■□ 3.38
HRH3-202ENST00000340177 RUSC2Q8N2Y8 1516 aa36.18■■■■□ 3.38
HRH3-202ENST00000340177 TRIM26Q12899 539 aaPredicted RBP36.12■■■■□ 3.37
HRH3-202ENST00000340177 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
HRH3-202ENST00000340177 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
HRH3-202ENST00000340177 HRCP23327 699 aa36.1■■■■□ 3.37
HRH3-202ENST00000340177 CSRNP3Q8WYN3 585 aa36■■■■□ 3.35
HRH3-202ENST00000340177 PPARGC1BQ86YN6 1023 aaKnown RBP35.91■■■■□ 3.34
HRH3-202ENST00000340177 EEA1Q15075 1411 aa35.9■■■■□ 3.34
HRH3-202ENST00000340177 UBTFP17480 764 aaKnown RBP35.8■■■■□ 3.32
HRH3-202ENST00000340177 CEP162Q5TB80 1403 aa35.75■■■■□ 3.31
HRH3-202ENST00000340177 TNIKQ9UKE5 1360 aa35.72■■■■□ 3.31
HRH3-202ENST00000340177 CC2D2AQ9P2K1 1620 aa35.71■■■■□ 3.31
HRH3-202ENST00000340177 TOP2BQ02880 1626 aa35.71■■■■□ 3.31
HRH3-202ENST00000340177 CFTRP13569 1480 aa35.7■■■■□ 3.3
HRH3-202ENST00000340177 GOLGA3Q08378 1498 aa35.66■■■■□ 3.3
HRH3-202ENST00000340177 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
HRH3-202ENST00000340177 CUX1P39880 1505 aa35.57■■■■□ 3.28
HRH3-202ENST00000340177 CEP164Q9UPV0 1460 aa35.54■■■■□ 3.28
HRH3-202ENST00000340177 TTBK1Q5TCY1 1321 aaPredicted RBP35.5■■■■□ 3.27
HRH3-202ENST00000340177 KIF21BO75037 1637 aa35.47■■■■□ 3.27
HRH3-202ENST00000340177 CADPSQ9ULU8 1353 aa35.46■■■■□ 3.27
HRH3-202ENST00000340177 RAPGEF2Q9Y4G8 1499 aa35.45■■■■□ 3.27
HRH3-202ENST00000340177 RANGAP1P46060 587 aaPredicted RBP35.36■■■■□ 3.25
HRH3-202ENST00000340177 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
HRH3-202ENST00000340177 CLIP1P30622 1438 aa35.25■■■■□ 3.23
HRH3-202ENST00000340177 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
HRH3-202ENST00000340177 PRXQ9BXM0 1461 aa35.16■■■■□ 3.22
HRH3-202ENST00000340177 NESP48681 1621 aa35.15■■■■□ 3.22
HRH3-202ENST00000340177 DNAJC5BQ9UF47 199 aa35.14■■■■□ 3.22
HRH3-202ENST00000340177 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
HRH3-202ENST00000340177 FGD5Q6ZNL6 1462 aa35.06■■■■□ 3.2
HRH3-202ENST00000340177 CUX2O14529 1486 aa35.05■■■■□ 3.2
HRH3-202ENST00000340177 ERICH3Q5RHP9 1530 aa35.04■■■■□ 3.2
HRH3-202ENST00000340177 VPS8Q8N3P4 1428 aa34.97■■■■□ 3.19
HRH3-202ENST00000340177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.92■■■■□ 3.18
HRH3-202ENST00000340177 IGF1RP08069 1367 aa34.9■■■■□ 3.18
HRH3-202ENST00000340177 ZEB1P37275 1124 aaPredicted RBP34.89■■■■□ 3.18
HRH3-202ENST00000340177 RAD54L2Q9Y4B4 1467 aa34.83■■■■□ 3.17
HRH3-202ENST00000340177 TOPBP1Q92547 1522 aa34.8■■■■□ 3.16
HRH3-202ENST00000340177 DNMBPQ6XZF7 1577 aa34.8■■■■□ 3.16
HRH3-202ENST00000340177 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
HRH3-202ENST00000340177 APLP2Q06481 763 aa34.78■■■■□ 3.16
HRH3-202ENST00000340177 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
HRH3-202ENST00000340177 LAMC3Q9Y6N6 1575 aa34.75■■■■□ 3.15
HRH3-202ENST00000340177 CARMIL1Q5VZK9 1371 aa34.74■■■■□ 3.15
HRH3-202ENST00000340177 CCER1Q8TC90 406 aaPredicted RBP34.72■■■■□ 3.15
HRH3-202ENST00000340177 URB2Q14146 1524 aaKnown RBP34.67■■■■□ 3.14
HRH3-202ENST00000340177 ARHGAP35Q9NRY4 1499 aa34.62■■■■□ 3.13
HRH3-202ENST00000340177 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
HRH3-202ENST00000340177 PDS5BQ9NTI5 1447 aa34.57■■■■□ 3.12
HRH3-202ENST00000340177 HNRNPUL2Q1KMD3 747 aaKnown RBP34.56■■■■□ 3.12
HRH3-202ENST00000340177 KANK4Q5T7N3 995 aaPredicted RBP34.53■■■■□ 3.12
HRH3-202ENST00000340177 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
HRH3-202ENST00000340177 TDRD9Q8NDG6 1382 aaKnown RBP34.46■■■■□ 3.11
HRH3-202ENST00000340177 P3H3Q8IVL6 736 aa34.39■■■■□ 3.1
HRH3-202ENST00000340177 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
HRH3-202ENST00000340177 GAPVD1Q14C86 1478 aa34.25■■■■□ 3.07
HRH3-202ENST00000340177 CUL7Q14999 1698 aa34.25■■■■□ 3.07
HRH3-202ENST00000340177 ABCA5Q8WWZ7 1642 aa34.23■■■■□ 3.07
HRH3-202ENST00000340177 FHOD3Q2V2M9 1422 aa34.18■■■■□ 3.06
HRH3-202ENST00000340177 ATP1B4Q9UN42 357 aaPredicted RBP34.15■■■■□ 3.06
HRH3-202ENST00000340177 TARBP1Q13395 1621 aaKnown RBP34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms