RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 NISCHQ9Y2I1 1504 aa48.92■■■■■ 5.42
CDKN1C-204ENST00000440480 CCDC180Q9P1Z9 1646 aa42.75■■■■■ 4.43
CDKN1C-204ENST00000440480 ABCC9O60706 1549 aa41.1■■■■■ 4.17
CDKN1C-204ENST00000440480 ZCCHC6Q5VYS8 1495 aaKnown RBP40.97■■■■■ 4.15
CDKN1C-204ENST00000440480 DCAF8L2P0C7V8 631 aa40.75■■■■■ 4.11
CDKN1C-204ENST00000440480 DCAF1Q9Y4B6 1507 aa40.44■■■■■ 4.06
CDKN1C-204ENST00000440480 MYO15BQ96JP2 1530 aa40.15■■■■■ 4.02
CDKN1C-204ENST00000440480 NACADO15069 1562 aa40.02■■■■■ 4
CDKN1C-204ENST00000440480 RB1CC1Q8TDY2 1594 aa39.79■■■■□ 3.96
CDKN1C-204ENST00000440480 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
CDKN1C-204ENST00000440480 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
CDKN1C-204ENST00000440480 UNC13AQ9UPW8 1703 aa38.96■■■■□ 3.83
CDKN1C-204ENST00000440480 PABPN1Q86U42 306 aaKnown RBP eCLIP38.62■■■■□ 3.77
CDKN1C-204ENST00000440480 BICRAQ9NZM4 1560 aa38.59■■■■□ 3.77
CDKN1C-204ENST00000440480 CECR2Q9BXF3 1484 aa38.05■■■■□ 3.68
CDKN1C-204ENST00000440480 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
CDKN1C-204ENST00000440480 RSF1Q96T23 1441 aaPredicted RBP37.82■■■■□ 3.64
CDKN1C-204ENST00000440480 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
CDKN1C-204ENST00000440480 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.63
CDKN1C-204ENST00000440480 SMARCA4P51532 1647 aa37.64■■■■□ 3.62
CDKN1C-204ENST00000440480 EIF4G1Q04637 1599 aaKnown RBP37.51■■■■□ 3.6
CDKN1C-204ENST00000440480 WIZO95785 1651 aa37.37■■■■□ 3.57
CDKN1C-204ENST00000440480 ATAD2BQ9ULI0 1458 aa37.21■■■■□ 3.55
CDKN1C-204ENST00000440480 PEG3Q9GZU2 1588 aa37.21■■■■□ 3.55
CDKN1C-204ENST00000440480 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
CDKN1C-204ENST00000440480 SMARCA2P51531 1590 aa37.16■■■■□ 3.54
CDKN1C-204ENST00000440480 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
CDKN1C-204ENST00000440480 TOP2AP11388 1531 aaKnown RBP37■■■■□ 3.51
CDKN1C-204ENST00000440480 NCAPD3P42695 1498 aa37■■■■□ 3.51
CDKN1C-204ENST00000440480 BAZ1BQ9UIG0 1483 aaKnown RBP36.98■■■■□ 3.51
CDKN1C-204ENST00000440480 HMGXB3Q12766 1538 aa36.82■■■■□ 3.49
CDKN1C-204ENST00000440480 CCDC88BA6NC98 1476 aa36.69■■■■□ 3.46
CDKN1C-204ENST00000440480 CHIC1Q5VXU3 224 aa36.13■■■■□ 3.37
CDKN1C-204ENST00000440480 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
CDKN1C-204ENST00000440480 CFTRP13569 1480 aa36.04■■■■□ 3.36
CDKN1C-204ENST00000440480 NESP48681 1621 aa35.82■■■■□ 3.32
CDKN1C-204ENST00000440480 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
CDKN1C-204ENST00000440480 LAMC3Q9Y6N6 1575 aa35.74■■■■□ 3.31
CDKN1C-204ENST00000440480 ABCC8Q09428 1581 aa35.7■■■■□ 3.31
CDKN1C-204ENST00000440480 WRNQ14191 1432 aaPredicted RBP eCLIP35.62■■■■□ 3.29
CDKN1C-204ENST00000440480 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
CDKN1C-204ENST00000440480 PDS5BQ9NTI5 1447 aa35.59■■■■□ 3.29
CDKN1C-204ENST00000440480 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
CDKN1C-204ENST00000440480 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
CDKN1C-204ENST00000440480 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
CDKN1C-204ENST00000440480 KIF21AQ7Z4S6 1674 aa35.38■■■■□ 3.25
CDKN1C-204ENST00000440480 ERCC6Q03468 1493 aa35.33■■■■□ 3.25
CDKN1C-204ENST00000440480 CUX1P39880 1505 aa35.32■■■■□ 3.24
CDKN1C-204ENST00000440480 TOP2BQ02880 1626 aa35.3■■■■□ 3.24
CDKN1C-204ENST00000440480 BIVM-ERCC5R4GMW8 1640 aa35.21■■■■□ 3.23
CDKN1C-204ENST00000440480 DNMBPQ6XZF7 1577 aa35.14■■■■□ 3.22
CDKN1C-204ENST00000440480 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
CDKN1C-204ENST00000440480 TOPBP1Q92547 1522 aa35.13■■■■□ 3.21
CDKN1C-204ENST00000440480 FAM9AQ8IZU1 332 aaPredicted RBP35.11■■■■□ 3.21
CDKN1C-204ENST00000440480 MRC2Q9UBG0 1479 aa35.08■■■■□ 3.21
CDKN1C-204ENST00000440480 FGD5Q6ZNL6 1462 aa35.03■■■■□ 3.2
CDKN1C-204ENST00000440480 THOC2Q8NI27 1593 aaKnown RBP35.03■■■■□ 3.2
CDKN1C-204ENST00000440480 SOGA1O94964 1423 aa35.02■■■■□ 3.2
CDKN1C-204ENST00000440480 POLA1P09884 1462 aaPredicted RBP34.94■■■■□ 3.18
CDKN1C-204ENST00000440480 WDR62O43379 1518 aa34.93■■■■□ 3.18
CDKN1C-204ENST00000440480 EEA1Q15075 1411 aa34.89■■■■□ 3.18
CDKN1C-204ENST00000440480 RUSC2Q8N2Y8 1516 aa34.88■■■■□ 3.17
CDKN1C-204ENST00000440480 RAD54L2Q9Y4B4 1467 aa34.83■■■■□ 3.17
CDKN1C-204ENST00000440480 CSRNP3Q8WYN3 585 aa34.83■■■■□ 3.17
CDKN1C-204ENST00000440480 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
CDKN1C-204ENST00000440480 CUX2O14529 1486 aa34.76■■■■□ 3.16
CDKN1C-204ENST00000440480 LOC105371045A0A1W2PR82 267 aa34.75■■■■□ 3.15
CDKN1C-204ENST00000440480 ABCA10Q8WWZ4 1543 aa34.72■■■■□ 3.15
CDKN1C-204ENST00000440480 EHMT2Q96KQ7 1210 aa34.62■■■■□ 3.13
CDKN1C-204ENST00000440480 IFT140Q96RY7 1462 aa34.61■■■■□ 3.13
CDKN1C-204ENST00000440480 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
CDKN1C-204ENST00000440480 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
CDKN1C-204ENST00000440480 IGF1RP08069 1367 aa34.54■■■■□ 3.12
CDKN1C-204ENST00000440480 WDR97A6NE52 1622 aa34.49■■■■□ 3.11
CDKN1C-204ENST00000440480 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
CDKN1C-204ENST00000440480 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.11e-6■■■□□ 16.1
CDKN1C-204ENST00000440480 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
CDKN1C-204ENST00000440480 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
CDKN1C-204ENST00000440480 ABCA5Q8WWZ7 1642 aa34.39■■■■□ 3.1
CDKN1C-204ENST00000440480 UBTFP17480 764 aaKnown RBP34.37■■■■□ 3.09
CDKN1C-204ENST00000440480 CARMIL1Q5VZK9 1371 aa34.37■■■■□ 3.09
CDKN1C-204ENST00000440480 GOLGA3Q08378 1498 aa34.36■■■■□ 3.09
CDKN1C-204ENST00000440480 KIF21BO75037 1637 aa34.34■■■■□ 3.09
CDKN1C-204ENST00000440480 RAPGEF2Q9Y4G8 1499 aa34.31■■■■□ 3.08
CDKN1C-204ENST00000440480 ERICH3Q5RHP9 1530 aa34.31■■■■□ 3.08
CDKN1C-204ENST00000440480 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
CDKN1C-204ENST00000440480 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
CDKN1C-204ENST00000440480 TNIKQ9UKE5 1360 aa34.2■■■■□ 3.07
CDKN1C-204ENST00000440480 CUL7Q14999 1698 aa34.17■■■■□ 3.06
CDKN1C-204ENST00000440480 PBRM1Q86U86 1689 aa34.13■■■■□ 3.05
CDKN1C-204ENST00000440480 FHAD1B1AJZ9 1412 aa34.1■■■■□ 3.05
CDKN1C-204ENST00000440480 SNAPC4Q5SXM2 1469 aa34.05■■■■□ 3.04
CDKN1C-204ENST00000440480 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.03
CDKN1C-204ENST00000440480 ADAMTS12P58397 1594 aa33.98■■■■□ 3.03
CDKN1C-204ENST00000440480 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
CDKN1C-204ENST00000440480 CEP162Q5TB80 1403 aa33.95■■■■□ 3.03
CDKN1C-204ENST00000440480 RANGAP1P46060 587 aaPredicted RBP33.93■■■■□ 3.02
CDKN1C-204ENST00000440480 FBLN2P98095 1184 aa33.93■■■■□ 3.02
CDKN1C-204ENST00000440480 SYNJ2O15056 1496 aa33.89■■■■□ 3.02
CDKN1C-204ENST00000440480 CLIP1P30622 1438 aa33.82■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms