Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 AC068587.7-201ENST00000641602 218 ntBASIC17.93■□□□□ 0.46
CCDC190Q86UF4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC190Q86UF4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 AC092720.2-201ENST00000602388 1665 ntBASIC17.92■□□□□ 0.46
CCDC190Q86UF4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC190Q86UF4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 RNF126P1-201ENST00000567452 1320 ntBASIC17.91■□□□□ 0.46
CCDC190Q86UF4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC190Q86UF4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC190Q86UF4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC190Q86UF4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 AC007613.1-201ENST00000572811 2597 ntBASIC17.88■□□□□ 0.45
CCDC190Q86UF4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 Z92544.1-202ENST00000571933 1220 ntBASIC17.88■□□□□ 0.45
CCDC190Q86UF4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC190Q86UF4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC190Q86UF4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms