RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 NISCHQ9Y2I1 1504 aa46.01■■■■■ 4.96
CPNE9-202ENST00000383831 CCDC180Q9P1Z9 1646 aa40.09■■■■■ 4.01
CPNE9-202ENST00000383831 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
CPNE9-202ENST00000383831 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
CPNE9-202ENST00000383831 DCAF8L2P0C7V8 631 aa37.98■■■■□ 3.67
CPNE9-202ENST00000383831 ABCC9O60706 1549 aa37.91■■■■□ 3.66
CPNE9-202ENST00000383831 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
CPNE9-202ENST00000383831 MYO15BQ96JP2 1530 aa37.54■■■■□ 3.6
CPNE9-202ENST00000383831 NACADO15069 1562 aa37.32■■■■□ 3.56
CPNE9-202ENST00000383831 RB1CC1Q8TDY2 1594 aa37■■■■□ 3.51
CPNE9-202ENST00000383831 SCRIBQ14160 1630 aa36.93■■■■□ 3.5
CPNE9-202ENST00000383831 UNC13AQ9UPW8 1703 aa36.32■■■■□ 3.4
CPNE9-202ENST00000383831 SUPT5HO00267 1087 aaKnown RBP36.17■■■■□ 3.38
CPNE9-202ENST00000383831 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
CPNE9-202ENST00000383831 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
CPNE9-202ENST00000383831 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.32
CPNE9-202ENST00000383831 RSF1Q96T23 1441 aaPredicted RBP35.72■■■■□ 3.31
CPNE9-202ENST00000383831 MROH2BQ7Z745 1585 aa35.58■■■■□ 3.29
CPNE9-202ENST00000383831 BAZ1AQ9NRL2 1556 aaPredicted RBP35.52■■■■□ 3.28
CPNE9-202ENST00000383831 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
CPNE9-202ENST00000383831 WIZO95785 1651 aa35.31■■■■□ 3.24
CPNE9-202ENST00000383831 PEG3Q9GZU2 1588 aa34.92■■■■□ 3.18
CPNE9-202ENST00000383831 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
CPNE9-202ENST00000383831 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
CPNE9-202ENST00000383831 ATAD2BQ9ULI0 1458 aa34.77■■■■□ 3.16
CPNE9-202ENST00000383831 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
CPNE9-202ENST00000383831 CHIC1Q5VXU3 224 aa34.64■■■■□ 3.14
CPNE9-202ENST00000383831 BAZ1BQ9UIG0 1483 aaKnown RBP34.58■■■■□ 3.13
CPNE9-202ENST00000383831 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
CPNE9-202ENST00000383831 NCAPD3P42695 1498 aa34.45■■■■□ 3.11
CPNE9-202ENST00000383831 HMGXB3Q12766 1538 aa34.42■■■■□ 3.1
CPNE9-202ENST00000383831 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
CPNE9-202ENST00000383831 TRIM41Q8WV44 630 aa33.98■■■■□ 3.03
CPNE9-202ENST00000383831 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
CPNE9-202ENST00000383831 CFTRP13569 1480 aa33.71■■■□□ 2.99
CPNE9-202ENST00000383831 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
CPNE9-202ENST00000383831 CADPSQ9ULU8 1353 aa33.57■■■□□ 2.96
CPNE9-202ENST00000383831 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
CPNE9-202ENST00000383831 SYNJ1O43426 1573 aa33.51■■■□□ 2.96
CPNE9-202ENST00000383831 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
CPNE9-202ENST00000383831 FAM9AQ8IZU1 332 aaPredicted RBP33.4■■■□□ 2.94
CPNE9-202ENST00000383831 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
CPNE9-202ENST00000383831 LOC105371045A0A1W2PR82 267 aa33.34■■■□□ 2.93
CPNE9-202ENST00000383831 NESP48681 1621 aa33.32■■■□□ 2.92
CPNE9-202ENST00000383831 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
CPNE9-202ENST00000383831 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
CPNE9-202ENST00000383831 CUX1P39880 1505 aa33.26■■■□□ 2.92
CPNE9-202ENST00000383831 SOGA1O94964 1423 aa33.23■■■□□ 2.91
CPNE9-202ENST00000383831 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
CPNE9-202ENST00000383831 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
CPNE9-202ENST00000383831 EEA1Q15075 1411 aa33.11■■■□□ 2.89
CPNE9-202ENST00000383831 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
CPNE9-202ENST00000383831 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
CPNE9-202ENST00000383831 EHMT2Q96KQ7 1210 aa32.96■■■□□ 2.87
CPNE9-202ENST00000383831 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.87
CPNE9-202ENST00000383831 DNMBPQ6XZF7 1577 aa32.94■■■□□ 2.86
CPNE9-202ENST00000383831 KIF21AQ7Z4S6 1674 aa32.92■■■□□ 2.86
CPNE9-202ENST00000383831 FGD5Q6ZNL6 1462 aa32.88■■■□□ 2.85
CPNE9-202ENST00000383831 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
CPNE9-202ENST00000383831 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
CPNE9-202ENST00000383831 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
CPNE9-202ENST00000383831 KIF21BO75037 1637 aa32.73■■■□□ 2.83
CPNE9-202ENST00000383831 POLA1P09884 1462 aaPredicted RBP32.72■■■□□ 2.83
CPNE9-202ENST00000383831 GOLGA3Q08378 1498 aa32.69■■■□□ 2.82
CPNE9-202ENST00000383831 CUX2O14529 1486 aa32.67■■■□□ 2.82
CPNE9-202ENST00000383831 RAD54L2Q9Y4B4 1467 aa32.63■■■□□ 2.81
CPNE9-202ENST00000383831 MRC2Q9UBG0 1479 aa32.6■■■□□ 2.81
CPNE9-202ENST00000383831 TNIKQ9UKE5 1360 aa32.59■■■□□ 2.81
CPNE9-202ENST00000383831 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
CPNE9-202ENST00000383831 PRXQ9BXM0 1461 aa32.55■■■□□ 2.8
CPNE9-202ENST00000383831 RAPGEF2Q9Y4G8 1499 aa32.55■■■□□ 2.8
CPNE9-202ENST00000383831 UBTFP17480 764 aaKnown RBP32.53■■■□□ 2.8
CPNE9-202ENST00000383831 WDR97A6NE52 1622 aa32.5■■■□□ 2.79
CPNE9-202ENST00000383831 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
CPNE9-202ENST00000383831 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
CPNE9-202ENST00000383831 IGF1RP08069 1367 aa32.46■■■□□ 2.79
CPNE9-202ENST00000383831 CEP162Q5TB80 1403 aa32.44■■■□□ 2.78
CPNE9-202ENST00000383831 WDR62O43379 1518 aa32.44■■■□□ 2.78
CPNE9-202ENST00000383831 TARBP1Q13395 1621 aaKnown RBP32.39■■■□□ 2.78
CPNE9-202ENST00000383831 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
CPNE9-202ENST00000383831 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
CPNE9-202ENST00000383831 CARMIL1Q5VZK9 1371 aa32.29■■■□□ 2.76
CPNE9-202ENST00000383831 TDRD9Q8NDG6 1382 aaKnown RBP32.29■■■□□ 2.76
CPNE9-202ENST00000383831 GAPVD1Q14C86 1478 aa32.24■■■□□ 2.75
CPNE9-202ENST00000383831 CUL7Q14999 1698 aa32.21■■■□□ 2.75
CPNE9-202ENST00000383831 IFT140Q96RY7 1462 aa32.2■■■□□ 2.75
CPNE9-202ENST00000383831 CLIP1P30622 1438 aa32.17■■■□□ 2.74
CPNE9-202ENST00000383831 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
CPNE9-202ENST00000383831 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.73
CPNE9-202ENST00000383831 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
CPNE9-202ENST00000383831 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
CPNE9-202ENST00000383831 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
CPNE9-202ENST00000383831 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
CPNE9-202ENST00000383831 ADAMTS12P58397 1594 aa31.91■■■□□ 2.7
CPNE9-202ENST00000383831 VPS8Q8N3P4 1428 aa31.9■■■□□ 2.7
CPNE9-202ENST00000383831 FHAD1B1AJZ9 1412 aa31.88■■■□□ 2.69
CPNE9-202ENST00000383831 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
CPNE9-202ENST00000383831 CTTNBP2Q8WZ74 1663 aa31.88■■■□□ 2.69
CPNE9-202ENST00000383831 ARHGAP35Q9NRY4 1499 aa31.86■■■□□ 2.69
CPNE9-202ENST00000383831 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 328.3 ms