RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
SOCS3-201ENST00000330871 HRCP23327 699 aa31■■■□□ 2.55
SOCS3-201ENST00000330871 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
SOCS3-201ENST00000330871 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.46
SOCS3-201ENST00000330871 PCGF6Q9BYE7 350 aa30.35■■■□□ 2.45
SOCS3-201ENST00000330871 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.42
SOCS3-201ENST00000330871 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
SOCS3-201ENST00000330871 MYO15BQ96JP2 1530 aa30■■■□□ 2.39
SOCS3-201ENST00000330871 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
SOCS3-201ENST00000330871 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
SOCS3-201ENST00000330871 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
SOCS3-201ENST00000330871 SCAF1Q9H7N4 1312 aaKnown RBP29.57■■■□□ 2.32
SOCS3-201ENST00000330871 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
SOCS3-201ENST00000330871 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
SOCS3-201ENST00000330871 LOC105371045A0A1W2PR82 267 aa29.17■■■□□ 2.26
SOCS3-201ENST00000330871 TRIM26Q12899 539 aaPredicted RBP29.15■■■□□ 2.26
SOCS3-201ENST00000330871 MYT1Q01538 1121 aa29■■■□□ 2.23
SOCS3-201ENST00000330871 ZEB1P37275 1124 aaPredicted RBP28.92■■■□□ 2.22
SOCS3-201ENST00000330871 ACIN1Q9UKV3 1341 aaKnown RBP28.69■■■□□ 2.18
SOCS3-201ENST00000330871 NEUROD1Q13562 356 aa28.67■■■□□ 2.18
SOCS3-201ENST00000330871 GTF3C3Q9Y5Q9 886 aa28.54■■■□□ 2.16
SOCS3-201ENST00000330871 ABCC9O60706 1549 aa28.32■■■□□ 2.12
SOCS3-201ENST00000330871 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
SOCS3-201ENST00000330871 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
SOCS3-201ENST00000330871 DIEXFQ68CQ4 756 aaKnown RBP28.08■■■□□ 2.09
SOCS3-201ENST00000330871 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
SOCS3-201ENST00000330871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
SOCS3-201ENST00000330871 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
SOCS3-201ENST00000330871 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
SOCS3-201ENST00000330871 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
SOCS3-201ENST00000330871 CCER1Q8TC90 406 aaPredicted RBP27.94■■■□□ 2.06
SOCS3-201ENST00000330871 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
SOCS3-201ENST00000330871 YTHDC1Q96MU7 727 aaKnown RBP27.8■■■□□ 2.04
SOCS3-201ENST00000330871 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
SOCS3-201ENST00000330871 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
SOCS3-201ENST00000330871 NACADO15069 1562 aa27.42■■□□□ 1.98
SOCS3-201ENST00000330871 ZNF316A6NFI3 1004 aaPredicted RBP27.42■■□□□ 1.98
SOCS3-201ENST00000330871 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
SOCS3-201ENST00000330871 MIER1Q8N108 512 aa27.37■■□□□ 1.97
SOCS3-201ENST00000330871 BCL11AQ9H165 835 aa27.37■■□□□ 1.97
SOCS3-201ENST00000330871 WIZO95785 1651 aa27.31■■□□□ 1.96
SOCS3-201ENST00000330871 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
SOCS3-201ENST00000330871 ANP32EQ9BTT0 268 aa27.18■■□□□ 1.94
SOCS3-201ENST00000330871 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
SOCS3-201ENST00000330871 SUPT16HQ9Y5B9 1047 aaKnown RBP27.05■■□□□ 1.92
SOCS3-201ENST00000330871 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
SOCS3-201ENST00000330871 TSHZ2Q9NRE2 1034 aa27.02■■□□□ 1.92
SOCS3-201ENST00000330871 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
SOCS3-201ENST00000330871 CCDC88BA6NC98 1476 aa26.91■■□□□ 1.9
SOCS3-201ENST00000330871 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
SOCS3-201ENST00000330871 CEP162Q5TB80 1403 aa26.89■■□□□ 1.9
SOCS3-201ENST00000330871 ABCC8Q09428 1581 aa26.89■■□□□ 1.89
SOCS3-201ENST00000330871 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
SOCS3-201ENST00000330871 SOGA1O94964 1423 aa26.77■■□□□ 1.88
SOCS3-201ENST00000330871 EEA1Q15075 1411 aa26.77■■□□□ 1.88
SOCS3-201ENST00000330871 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
SOCS3-201ENST00000330871 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
SOCS3-201ENST00000330871 CLSPNQ9HAW4 1339 aa26.75■■□□□ 1.87
SOCS3-201ENST00000330871 HNRNPUL2Q1KMD3 747 aaKnown RBP26.68■■□□□ 1.86
SOCS3-201ENST00000330871 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
SOCS3-201ENST00000330871 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
SOCS3-201ENST00000330871 GOLGA3Q08378 1498 aa26.58■■□□□ 1.85
SOCS3-201ENST00000330871 BCANQ96GW7 911 aa26.58■■□□□ 1.85
SOCS3-201ENST00000330871 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
SOCS3-201ENST00000330871 PRKCSHP14314 528 aaPredicted RBP26.4■■□□□ 1.82
SOCS3-201ENST00000330871 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.81
SOCS3-201ENST00000330871 RBM19Q9Y4C8 960 aaKnown RBP26.36■■□□□ 1.81
SOCS3-201ENST00000330871 FKBP8Q14318 412 aa26.32■■□□□ 1.8
SOCS3-201ENST00000330871 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
SOCS3-201ENST00000330871 KIF21BO75037 1637 aa26.32■■□□□ 1.8
SOCS3-201ENST00000330871 CLIP1P30622 1438 aa26.31■■□□□ 1.8
SOCS3-201ENST00000330871 VPS8Q8N3P4 1428 aa26.26■■□□□ 1.79
SOCS3-201ENST00000330871 APLP2Q06481 763 aa26.23■■□□□ 1.79
SOCS3-201ENST00000330871 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
SOCS3-201ENST00000330871 SYNJ1O43426 1573 aa26.22■■□□□ 1.79
SOCS3-201ENST00000330871 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
SOCS3-201ENST00000330871 MSH5O43196 834 aa26.19■■□□□ 1.78
SOCS3-201ENST00000330871 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
SOCS3-201ENST00000330871 ITGAEP38570 1179 aa26.17■■□□□ 1.78
SOCS3-201ENST00000330871 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
SOCS3-201ENST00000330871 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
SOCS3-201ENST00000330871 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
SOCS3-201ENST00000330871 NEFLP07196 543 aa26.01■■□□□ 1.75
SOCS3-201ENST00000330871 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
SOCS3-201ENST00000330871 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
SOCS3-201ENST00000330871 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
SOCS3-201ENST00000330871 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
SOCS3-201ENST00000330871 TRIM52Q96A61 297 aa25.86■■□□□ 1.73
SOCS3-201ENST00000330871 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
SOCS3-201ENST00000330871 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
SOCS3-201ENST00000330871 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
SOCS3-201ENST00000330871 FANCIQ9NVI1 1328 aa25.79■■□□□ 1.72
SOCS3-201ENST00000330871 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
SOCS3-201ENST00000330871 DEKP35659 375 aaKnown RBP25.78■■□□□ 1.72
SOCS3-201ENST00000330871 KANK4Q5T7N3 995 aaPredicted RBP25.76■■□□□ 1.71
SOCS3-201ENST00000330871 BIVM-ERCC5R4GMW8 1640 aa25.76■■□□□ 1.71
SOCS3-201ENST00000330871 RRBP1Q9P2E9 1410 aaKnown RBP25.73■■□□□ 1.71
SOCS3-201ENST00000330871 ANO8Q9HCE9 1232 aaPredicted RBP25.72■■□□□ 1.71
SOCS3-201ENST00000330871 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
SOCS3-201ENST00000330871 IRX6P78412 446 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms