Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NARF-227ENST00000584965 300 ntTSL 315.8■□□□□ 0.123e-7■■□□□ 11.9
PABPN1Q86U42 CCNL2-213ENST00000481223 2815 ntTSL 230.15■■■□□ 2.421e-14■■□□□ 11.9
PABPN1Q86U42 CCNL2-204ENST00000418865 3082 ntTSL 1 (best)16.79■□□□□ 0.281e-14■■□□□ 11.9
PABPN1Q86U42 NADSYN1-202ENST00000524450 376 ntTSL 214.91□□□□□ -0.023e-8■■□□□ 11.9
PABPN1Q86U42 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.156e-10■■□□□ 11.9
PABPN1Q86U42 PABPC1L-210ENST00000474208 308 ntTSL 526.03■■□□□ 1.766e-10■■□□□ 11.9
PABPN1Q86U42 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.485e-12■■□□□ 11.9
PABPN1Q86U42 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.255e-7■■□□□ 11.9
PABPN1Q86U42 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC27.04■■□□□ 1.923e-7■■□□□ 11.9
PABPN1Q86U42 CDK16-208ENST00000517426 1574 ntTSL 538.88■■■■□ 3.813e-6■■□□□ 11.9
PABPN1Q86U42 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.573e-6■■□□□ 11.9
PABPN1Q86U42 CDK16-220ENST00000523344 1266 ntTSL 524.51■■□□□ 1.513e-6■■□□□ 11.9
PABPN1Q86U42 CDK16-203ENST00000428400 3016 ntTSL 219.12■□□□□ 0.653e-6■■□□□ 11.9
PABPN1Q86U42 MAPK8IP3-211ENST00000567352 507 ntTSL 226.99■■□□□ 1.912e-8■■□□□ 11.9
PABPN1Q86U42 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC29.72■■■□□ 2.354e-8■■□□□ 11.9
PABPN1Q86U42 SNRNP200-205ENST00000480835 540 ntTSL 226.63■■□□□ 1.857e-8■■□□□ 11.9
PABPN1Q86U42 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC27.28■■□□□ 1.963e-11■■□□□ 11.9
PABPN1Q86U42 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.393e-11■■□□□ 11.9
PABPN1Q86U42 CLASRP-208ENST00000587472 345 ntTSL 241.09■■■■■ 4.175e-7■■□□□ 11.9
PABPN1Q86U42 PSMD3-202ENST00000415039 1598 ntTSL 236.42■■■■□ 3.425e-8■■□□□ 11.9
PABPN1Q86U42 PSMD3-204ENST00000540504 458 ntTSL 334.53■■■■□ 3.125e-8■■□□□ 11.9
PABPN1Q86U42 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.885e-8■■□□□ 11.9
PABPN1Q86U42 TELO2-207ENST00000568240 1327 ntTSL 1 (best)33.02■■■□□ 2.887e-9■■□□□ 11.9
PABPN1Q86U42 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.615e-8■■□□□ 11.9
PABPN1Q86U42 CAD-204ENST00000456311 837 ntTSL 526.13■■□□□ 1.775e-8■■□□□ 11.9
PABPN1Q86U42 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.257e-9■■□□□ 11.9
PABPN1Q86U42 PCYT2-208ENST00000571944 366 ntTSL 326.73■■□□□ 1.875e-7■■□□□ 11.9
PABPN1Q86U42 NECAB3-208ENST00000480994 732 ntTSL 534.02■■■■□ 3.047e-9■■□□□ 11.9
PABPN1Q86U42 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.721e-7■■□□□ 11.8
PABPN1Q86U42 PLCG1-220ENST00000617873 583 ntTSL 325.3■■□□□ 1.641e-7■■□□□ 11.8
PABPN1Q86U42 LAMA5-204ENST00000462415 585 ntTSL 233.45■■■□□ 2.955e-11■■□□□ 11.8
PABPN1Q86U42 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC47.16■■■■■ 5.141e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC40.77■■■■■ 4.121e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC40.08■■■■■ 4.011e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-207ENST00000478180 963 ntTSL 537.94■■■■□ 3.661e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-204ENST00000421787 1924 ntTSL 237.16■■■■□ 3.541e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-201ENST00000028008 1220 ntTSL 535.57■■■■□ 3.281e-9■■□□□ 11.8
PABPN1Q86U42 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC33.34■■■□□ 2.931e-9■■□□□ 11.8
PABPN1Q86U42 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.491e-9■■□□□ 11.8
PABPN1Q86U42 CCNL2-220ENST00000505849 1503 ntTSL 230.32■■■□□ 2.441e-14■■□□□ 11.8
PABPN1Q86U42 NOP56-206ENST00000466447 1094 ntTSL 224.38■■□□□ 1.497e-13■■□□□ 11.8
PABPN1Q86U42 NOP56-205ENST00000462630 859 ntTSL 220.21■□□□□ 0.837e-13■■□□□ 11.8
PABPN1Q86U42 NOP56-208ENST00000467857 735 ntTSL 214.87□□□□□ -0.037e-13■■□□□ 11.8
PABPN1Q86U42 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC19.52■□□□□ 0.712e-6■■□□□ 11.8
PABPN1Q86U42 MYO19-204ENST00000610992 5743 ntTSL 218.81■□□□□ 0.62e-6■■□□□ 11.8
PABPN1Q86U42 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.382e-6■■□□□ 11.8
PABPN1Q86U42 MYO19-226ENST00000621550 4299 ntTSL 516.01■□□□□ 0.152e-6■■□□□ 11.8
PABPN1Q86U42 MYO19-207ENST00000611622 4226 ntTSL 1 (best)14.52□□□□□ -0.092e-6■■□□□ 11.8
PABPN1Q86U42 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.832e-8■■□□□ 11.8
PABPN1Q86U42 SPIRE2-204ENST00000562029 2215 ntTSL 230.32■■■□□ 2.442e-8■■□□□ 11.8
PABPN1Q86U42 SPIRE2-208ENST00000565628 505 ntTSL 328.79■■■□□ 2.22e-8■■□□□ 11.8
PABPN1Q86U42 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.773e-8■■□□□ 11.8
PABPN1Q86U42 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC28.6■■■□□ 2.173e-8■■□□□ 11.8
PABPN1Q86U42 CCNL2-215ENST00000482621 2059 ntTSL 227.57■■■□□ 23e-8■■□□□ 11.8
PABPN1Q86U42 CCNL2-214ENST00000482365 2620 ntTSL 221.58■■□□□ 1.043e-8■■□□□ 11.8
PABPN1Q86U42 CCNL2-218ENST00000496007 4452 ntTSL 220.72■□□□□ 0.913e-8■■□□□ 11.8
PABPN1Q86U42 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.691e-6■■□□□ 11.8
PABPN1Q86U42 ENO2-204ENST00000535275 724 ntTSL 318.06■□□□□ 0.482e-8■■□□□ 11.8
PABPN1Q86U42 MINK1-210ENST00000574871 3150 ntTSL 218.55■□□□□ 0.562e-6■■□□□ 11.8
PABPN1Q86U42 EPS8L2-213ENST00000529346 1718 ntTSL 241.04■■■■■ 4.161e-8■■□□□ 11.8
PABPN1Q86U42 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC24.31■■□□□ 1.483e-19■■□□□ 11.8
PABPN1Q86U42 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.783e-19■■□□□ 11.8
PABPN1Q86U42 DDX39B-221ENST00000484566 857 ntTSL 518.76■□□□□ 0.593e-19■■□□□ 11.8
PABPN1Q86U42 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.543e-19■■□□□ 11.8
PABPN1Q86U42 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.523e-19■■□□□ 11.8
PABPN1Q86U42 DDX39B-217ENST00000474961 974 ntTSL 217.68■□□□□ 0.423e-19■■□□□ 11.8
PABPN1Q86U42 DDX39B-215ENST00000462256 4027 ntTSL 216.47■□□□□ 0.233e-19■■□□□ 11.8
PABPN1Q86U42 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.284e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC32.38■■■□□ 2.771e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-211ENST00000590558 2884 ntTSL 531.41■■■□□ 2.621e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC29.52■■■□□ 2.321e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.951e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC24.83■■□□□ 1.571e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-206ENST00000587552 2816 ntTSL 223.39■■□□□ 1.331e-7■■□□□ 11.8
PABPN1Q86U42 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC21.8■■□□□ 1.081e-7■■□□□ 11.8
PABPN1Q86U42 CCNL2-211ENST00000480479 2792 ntTSL 220.89■□□□□ 0.932e-8■■□□□ 11.7
PABPN1Q86U42 EIF3G-210ENST00000590158 1034 ntTSL 231.4■■■□□ 2.628e-7■■□□□ 11.7
PABPN1Q86U42 EIF3G-213ENST00000593054 453 ntTSL 522.66■■□□□ 1.228e-7■■□□□ 11.7
PABPN1Q86U42 CLASRP-214ENST00000591904 506 ntTSL 538.96■■■■□ 3.836e-7■■□□□ 11.7
PABPN1Q86U42 CLASRP-206ENST00000585615 633 ntTSL 230.95■■■□□ 2.556e-7■■□□□ 11.7
PABPN1Q86U42 MIB2-229ENST00000514234 2562 ntTSL 231.33■■■□□ 2.611e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC30.07■■■□□ 2.41e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-213ENST00000487053 3252 ntTSL 529.3■■■□□ 2.281e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC29.06■■■□□ 2.241e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.131e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.791e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.781e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.741e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.711e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-214ENST00000489635 3034 ntTSL 225.65■■□□□ 1.71e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-220ENST00000506488 2997 ntTSL 525.3■■□□□ 1.641e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-210ENST00000479659 4247 ntTSL 224.05■■□□□ 1.441e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-226ENST00000511502 3326 ntTSL 223.99■■□□□ 1.431e-6■■□□□ 11.7
PABPN1Q86U42 MIB2-208ENST00000473511 1332 ntTSL 546.07■■■■■ 4.972e-6■■□□□ 11.7
PABPN1Q86U42 GPS1-225ENST00000585084 997 ntTSL 358.62■■■■■ 6.971e-6■■□□□ 11.7
PABPN1Q86U42 DDX39B-203ENST00000417023 561 ntTSL 525.35■■□□□ 1.655e-19■■□□□ 11.7
PABPN1Q86U42 ARAP1-216ENST00000542596 699 ntTSL 529.76■■■□□ 2.351e-6■■□□□ 11.7
PABPN1Q86U42 NECAB3-222ENST00000607805 969 ntTSL 544.58■■■■■ 4.738e-9■■□□□ 11.7
PABPN1Q86U42 NECAB3-219ENST00000606690 900 ntTSL 529.82■■■□□ 2.368e-9■■□□□ 11.7
PABPN1Q86U42 NECAB3-203ENST00000439478 925 ntTSL 529.82■■■□□ 2.368e-9■■□□□ 11.7
Retrieved 100 of 8,254 protein–RNA pairs in 108.4 ms