RNA–Protein interactions for RNA: ENST00000417023.5

DDX39B-203, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-203ENST00000417023 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
DDX39B-203ENST00000417023 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
DDX39B-203ENST00000417023 ABCC9O60706 1549 aa27.16■■□□□ 1.94
DDX39B-203ENST00000417023 NACADO15069 1562 aa26.21■■□□□ 1.79
DDX39B-203ENST00000417023 RB1CC1Q8TDY2 1594 aa26.21■■□□□ 1.79
DDX39B-203ENST00000417023 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
DDX39B-203ENST00000417023 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
DDX39B-203ENST00000417023 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
DDX39B-203ENST00000417023 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
DDX39B-203ENST00000417023 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
DDX39B-203ENST00000417023 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
DDX39B-203ENST00000417023 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
DDX39B-203ENST00000417023 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.655e-19■■□□□ 11.7
DDX39B-203ENST00000417023 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
DDX39B-203ENST00000417023 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
DDX39B-203ENST00000417023 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
DDX39B-203ENST00000417023 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
DDX39B-203ENST00000417023 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
DDX39B-203ENST00000417023 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
DDX39B-203ENST00000417023 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
DDX39B-203ENST00000417023 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
DDX39B-203ENST00000417023 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
DDX39B-203ENST00000417023 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
DDX39B-203ENST00000417023 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
DDX39B-203ENST00000417023 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
DDX39B-203ENST00000417023 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
DDX39B-203ENST00000417023 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
DDX39B-203ENST00000417023 RSF1Q96T23 1441 aaPredicted RBP23.92■■□□□ 1.42
DDX39B-203ENST00000417023 WIZO95785 1651 aa23.9■■□□□ 1.42
DDX39B-203ENST00000417023 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
DDX39B-203ENST00000417023 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
DDX39B-203ENST00000417023 NESP48681 1621 aa23.53■■□□□ 1.36
DDX39B-203ENST00000417023 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
DDX39B-203ENST00000417023 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
DDX39B-203ENST00000417023 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
DDX39B-203ENST00000417023 CFTRP13569 1480 aa23.35■■□□□ 1.33
DDX39B-203ENST00000417023 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
DDX39B-203ENST00000417023 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
DDX39B-203ENST00000417023 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
DDX39B-203ENST00000417023 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
DDX39B-203ENST00000417023 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
DDX39B-203ENST00000417023 CUX2O14529 1486 aa23.2■■□□□ 1.3
DDX39B-203ENST00000417023 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
DDX39B-203ENST00000417023 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
DDX39B-203ENST00000417023 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
DDX39B-203ENST00000417023 WDR62O43379 1518 aa23.06■■□□□ 1.28
DDX39B-203ENST00000417023 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
DDX39B-203ENST00000417023 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
DDX39B-203ENST00000417023 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
DDX39B-203ENST00000417023 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
DDX39B-203ENST00000417023 CUX1P39880 1505 aa22.67■■□□□ 1.22
DDX39B-203ENST00000417023 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
DDX39B-203ENST00000417023 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
DDX39B-203ENST00000417023 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
DDX39B-203ENST00000417023 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
DDX39B-203ENST00000417023 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
DDX39B-203ENST00000417023 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
DDX39B-203ENST00000417023 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
DDX39B-203ENST00000417023 SOGA1O94964 1423 aa22.51■■□□□ 1.19
DDX39B-203ENST00000417023 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
DDX39B-203ENST00000417023 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
DDX39B-203ENST00000417023 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
DDX39B-203ENST00000417023 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
DDX39B-203ENST00000417023 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
DDX39B-203ENST00000417023 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.181e-14■■■■■ 26.8
DDX39B-203ENST00000417023 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
DDX39B-203ENST00000417023 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
DDX39B-203ENST00000417023 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
DDX39B-203ENST00000417023 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
DDX39B-203ENST00000417023 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
DDX39B-203ENST00000417023 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
DDX39B-203ENST00000417023 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
DDX39B-203ENST00000417023 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
DDX39B-203ENST00000417023 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
DDX39B-203ENST00000417023 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
DDX39B-203ENST00000417023 CHD1O14646 1710 aa22.18■■□□□ 1.14
DDX39B-203ENST00000417023 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
DDX39B-203ENST00000417023 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
DDX39B-203ENST00000417023 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
DDX39B-203ENST00000417023 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
DDX39B-203ENST00000417023 FBLN2P98095 1184 aa22.04■■□□□ 1.12
DDX39B-203ENST00000417023 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
DDX39B-203ENST00000417023 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
DDX39B-203ENST00000417023 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
DDX39B-203ENST00000417023 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
DDX39B-203ENST00000417023 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
DDX39B-203ENST00000417023 IGF1RP08069 1367 aa21.97■■□□□ 1.11
DDX39B-203ENST00000417023 CUL7Q14999 1698 aa21.94■■□□□ 1.1
DDX39B-203ENST00000417023 NUP160Q12769 1436 aa21.91■■□□□ 1.1
DDX39B-203ENST00000417023 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
DDX39B-203ENST00000417023 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
DDX39B-203ENST00000417023 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
DDX39B-203ENST00000417023 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
DDX39B-203ENST00000417023 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
DDX39B-203ENST00000417023 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
DDX39B-203ENST00000417023 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
DDX39B-203ENST00000417023 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
DDX39B-203ENST00000417023 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
DDX39B-203ENST00000417023 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
DDX39B-203ENST00000417023 EEA1Q15075 1411 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms