RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
PSMD3-202ENST00000415039 CCDC180Q9P1Z9 1646 aa41.41■■■■■ 4.22
PSMD3-202ENST00000415039 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.04
PSMD3-202ENST00000415039 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
PSMD3-202ENST00000415039 SHROOM4Q9ULL8 1493 aa39.28■■■■□ 3.88
PSMD3-202ENST00000415039 DCAF8L2P0C7V8 631 aa39.17■■■■□ 3.86
PSMD3-202ENST00000415039 MYO15BQ96JP2 1530 aa38.9■■■■□ 3.82
PSMD3-202ENST00000415039 ABCC9O60706 1549 aa38.51■■■■□ 3.76
PSMD3-202ENST00000415039 NACADO15069 1562 aa38.44■■■■□ 3.74
PSMD3-202ENST00000415039 SUPT5HO00267 1087 aaKnown RBP38.14■■■■□ 3.7
PSMD3-202ENST00000415039 SCRIBQ14160 1630 aa38.07■■■■□ 3.69
PSMD3-202ENST00000415039 RB1CC1Q8TDY2 1594 aa37.94■■■■□ 3.66
PSMD3-202ENST00000415039 RSF1Q96T23 1441 aaPredicted RBP37.28■■■■□ 3.56
PSMD3-202ENST00000415039 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
PSMD3-202ENST00000415039 CECR2Q9BXF3 1484 aa37.02■■■■□ 3.52
PSMD3-202ENST00000415039 CHIC1Q5VXU3 224 aa36.9■■■■□ 3.5
PSMD3-202ENST00000415039 MROH2BQ7Z745 1585 aa36.9■■■■□ 3.5
PSMD3-202ENST00000415039 BAZ1AQ9NRL2 1556 aaPredicted RBP36.86■■■■□ 3.49
PSMD3-202ENST00000415039 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
PSMD3-202ENST00000415039 WIZO95785 1651 aa36.62■■■■□ 3.45
PSMD3-202ENST00000415039 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
PSMD3-202ENST00000415039 PABPN1Q86U42 306 aaKnown RBP eCLIP36.42■■■■□ 3.425e-8■■□□□ 11.9
PSMD3-202ENST00000415039 TOP2AP11388 1531 aaKnown RBP36.31■■■■□ 3.4
PSMD3-202ENST00000415039 PEG3Q9GZU2 1588 aa36.16■■■■□ 3.38
PSMD3-202ENST00000415039 SMARCA2P51531 1590 aa35.96■■■■□ 3.35
PSMD3-202ENST00000415039 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
PSMD3-202ENST00000415039 EIF4G1Q04637 1599 aaKnown RBP35.91■■■■□ 3.34
PSMD3-202ENST00000415039 TRIM41Q8WV44 630 aa35.89■■■■□ 3.34
PSMD3-202ENST00000415039 ATAD2BQ9ULI0 1458 aa35.84■■■■□ 3.33
PSMD3-202ENST00000415039 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
PSMD3-202ENST00000415039 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
PSMD3-202ENST00000415039 NCAPD3P42695 1498 aa35.46■■■■□ 3.27
PSMD3-202ENST00000415039 LOC105371045A0A1W2PR82 267 aa35.44■■■■□ 3.26
PSMD3-202ENST00000415039 ABCC8Q09428 1581 aa35.31■■■■□ 3.24
PSMD3-202ENST00000415039 FAM9AQ8IZU1 332 aaPredicted RBP35.16■■■■□ 3.22
PSMD3-202ENST00000415039 WRNQ14191 1432 aaPredicted RBP eCLIP35.09■■■■□ 3.21
PSMD3-202ENST00000415039 EEA1Q15075 1411 aa35■■■■□ 3.19
PSMD3-202ENST00000415039 CC2D2AQ9P2K1 1620 aa34.9■■■■□ 3.18
PSMD3-202ENST00000415039 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
PSMD3-202ENST00000415039 CFTRP13569 1480 aa34.83■■■■□ 3.17
PSMD3-202ENST00000415039 SOGA1O94964 1423 aa34.8■■■■□ 3.16
PSMD3-202ENST00000415039 TOP2BQ02880 1626 aa34.74■■■■□ 3.15
PSMD3-202ENST00000415039 PRDM2Q13029 1718 aa34.7■■■■□ 3.15
PSMD3-202ENST00000415039 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
PSMD3-202ENST00000415039 CSRNP3Q8WYN3 585 aa34.68■■■■□ 3.14
PSMD3-202ENST00000415039 RUSC2Q8N2Y8 1516 aa34.61■■■■□ 3.13
PSMD3-202ENST00000415039 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
PSMD3-202ENST00000415039 EHMT2Q96KQ7 1210 aa34.56■■■■□ 3.12
PSMD3-202ENST00000415039 TNIKQ9UKE5 1360 aa34.51■■■■□ 3.11
PSMD3-202ENST00000415039 PCGF6Q9BYE7 350 aa34.49■■■■□ 3.11
PSMD3-202ENST00000415039 GOLGA3Q08378 1498 aa34.48■■■■□ 3.11
PSMD3-202ENST00000415039 CUX1P39880 1505 aa34.46■■■■□ 3.11
PSMD3-202ENST00000415039 KIF21BO75037 1637 aa34.46■■■■□ 3.11
PSMD3-202ENST00000415039 TRIM26Q12899 539 aaPredicted RBP34.43■■■■□ 3.1
PSMD3-202ENST00000415039 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
PSMD3-202ENST00000415039 CEP162Q5TB80 1403 aa34.32■■■■□ 3.08
PSMD3-202ENST00000415039 UBTFP17480 764 aaKnown RBP34.26■■■■□ 3.07
PSMD3-202ENST00000415039 FANCD2Q9BXW9 1451 aa34.18■■■■□ 3.06
PSMD3-202ENST00000415039 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
PSMD3-202ENST00000415039 LAMC3Q9Y6N6 1575 aa34.16■■■■□ 3.06
PSMD3-202ENST00000415039 ERICH3Q5RHP9 1530 aa34.13■■■■□ 3.05
PSMD3-202ENST00000415039 PRXQ9BXM0 1461 aa34.09■■■■□ 3.05
PSMD3-202ENST00000415039 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.04
PSMD3-202ENST00000415039 HRCP23327 699 aa34.06■■■■□ 3.04
PSMD3-202ENST00000415039 DNMBPQ6XZF7 1577 aa34.01■■■■□ 3.04
PSMD3-202ENST00000415039 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
PSMD3-202ENST00000415039 NESP48681 1621 aa33.99■■■■□ 3.03
PSMD3-202ENST00000415039 CLIP1P30622 1438 aa33.92■■■■□ 3.02
PSMD3-202ENST00000415039 CUX2O14529 1486 aa33.9■■■■□ 3.02
PSMD3-202ENST00000415039 TOPBP1Q92547 1522 aa33.88■■■■□ 3.01
PSMD3-202ENST00000415039 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
PSMD3-202ENST00000415039 IGF1RP08069 1367 aa33.78■■■■□ 3
PSMD3-202ENST00000415039 ABCA10Q8WWZ4 1543 aa33.76■■■□□ 2.99
PSMD3-202ENST00000415039 POLA1P09884 1462 aaPredicted RBP33.75■■■□□ 2.99
PSMD3-202ENST00000415039 VPS8Q8N3P4 1428 aa33.73■■■□□ 2.99
PSMD3-202ENST00000415039 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
PSMD3-202ENST00000415039 URB2Q14146 1524 aaKnown RBP33.7■■■□□ 2.99
PSMD3-202ENST00000415039 PPARGC1BQ86YN6 1023 aaKnown RBP33.66■■■□□ 2.98
PSMD3-202ENST00000415039 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
PSMD3-202ENST00000415039 RAD54L2Q9Y4B4 1467 aa33.62■■■□□ 2.97
PSMD3-202ENST00000415039 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
PSMD3-202ENST00000415039 WDR97A6NE52 1622 aa33.56■■■□□ 2.96
PSMD3-202ENST00000415039 CUL7Q14999 1698 aa33.51■■■□□ 2.95
PSMD3-202ENST00000415039 ARAP1Q96P48 1450 aa33.49■■■□□ 2.95
PSMD3-202ENST00000415039 ZEB1P37275 1124 aaPredicted RBP33.46■■■□□ 2.95
PSMD3-202ENST00000415039 APLP2Q06481 763 aa33.45■■■□□ 2.95
PSMD3-202ENST00000415039 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
PSMD3-202ENST00000415039 RANGAP1P46060 587 aaPredicted RBP33.4■■■□□ 2.94
PSMD3-202ENST00000415039 ARHGAP35Q9NRY4 1499 aa33.39■■■□□ 2.93
PSMD3-202ENST00000415039 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.93
PSMD3-202ENST00000415039 TARBP1Q13395 1621 aaKnown RBP33.32■■■□□ 2.92
PSMD3-202ENST00000415039 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
PSMD3-202ENST00000415039 TTBK1Q5TCY1 1321 aaPredicted RBP33.26■■■□□ 2.92
PSMD3-202ENST00000415039 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
PSMD3-202ENST00000415039 CTTNBP2Q8WZ74 1663 aa33.19■■■□□ 2.9
PSMD3-202ENST00000415039 WDR62O43379 1518 aa33.18■■■□□ 2.9
PSMD3-202ENST00000415039 EFCAB5A4FU69 1503 aa33.16■■■□□ 2.9
PSMD3-202ENST00000415039 MAP3K1Q13233 1512 aa33.1■■■□□ 2.89
PSMD3-202ENST00000415039 IFT140Q96RY7 1462 aa33.09■■■□□ 2.89
PSMD3-202ENST00000415039 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms