RNA–Protein interactions for RNA: ENST00000462415.2

LAMA5-204, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-204ENST00000462415 NISCHQ9Y2I1 1504 aa41.45■■■■■ 4.23
LAMA5-204ENST00000462415 CCDC180Q9P1Z9 1646 aa36.91■■■■□ 3.5
LAMA5-204ENST00000462415 ABCC9O60706 1549 aa35.88■■■■□ 3.33
LAMA5-204ENST00000462415 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
LAMA5-204ENST00000462415 RB1CC1Q8TDY2 1594 aa34.59■■■■□ 3.13
LAMA5-204ENST00000462415 NACADO15069 1562 aa34.56■■■■□ 3.12
LAMA5-204ENST00000462415 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
LAMA5-204ENST00000462415 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
LAMA5-204ENST00000462415 DCAF1Q9Y4B6 1507 aa34.29■■■■□ 3.08
LAMA5-204ENST00000462415 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
LAMA5-204ENST00000462415 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
LAMA5-204ENST00000462415 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
LAMA5-204ENST00000462415 PABPN1Q86U42 306 aaKnown RBP eCLIP33.45■■■□□ 2.955e-11■■□□□ 11.8
LAMA5-204ENST00000462415 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
LAMA5-204ENST00000462415 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
LAMA5-204ENST00000462415 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
LAMA5-204ENST00000462415 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
LAMA5-204ENST00000462415 CECR2Q9BXF3 1484 aa32.28■■■□□ 2.76
LAMA5-204ENST00000462415 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
LAMA5-204ENST00000462415 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
LAMA5-204ENST00000462415 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
LAMA5-204ENST00000462415 SMARCA2P51531 1590 aa31.91■■■□□ 2.7
LAMA5-204ENST00000462415 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
LAMA5-204ENST00000462415 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
LAMA5-204ENST00000462415 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
LAMA5-204ENST00000462415 HMGXB3Q12766 1538 aa31.79■■■□□ 2.68
LAMA5-204ENST00000462415 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.66
LAMA5-204ENST00000462415 WIZO95785 1651 aa31.7■■■□□ 2.66
LAMA5-204ENST00000462415 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
LAMA5-204ENST00000462415 TOP2AP11388 1531 aaKnown RBP31.35■■■□□ 2.61
LAMA5-204ENST00000462415 NESP48681 1621 aa31.09■■■□□ 2.57
LAMA5-204ENST00000462415 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
LAMA5-204ENST00000462415 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
LAMA5-204ENST00000462415 CCDC88BA6NC98 1476 aa30.9■■■□□ 2.54
LAMA5-204ENST00000462415 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
LAMA5-204ENST00000462415 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
LAMA5-204ENST00000462415 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
LAMA5-204ENST00000462415 CFTRP13569 1480 aa30.78■■■□□ 2.52
LAMA5-204ENST00000462415 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
LAMA5-204ENST00000462415 PDS5BQ9NTI5 1447 aa30.74■■■□□ 2.51
LAMA5-204ENST00000462415 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
LAMA5-204ENST00000462415 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
LAMA5-204ENST00000462415 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
LAMA5-204ENST00000462415 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
LAMA5-204ENST00000462415 CUX2O14529 1486 aa30.5■■■□□ 2.47
LAMA5-204ENST00000462415 WDR62O43379 1518 aa30.42■■■□□ 2.46
LAMA5-204ENST00000462415 URB2Q14146 1524 aaKnown RBP30.32■■■□□ 2.44
LAMA5-204ENST00000462415 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
LAMA5-204ENST00000462415 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
LAMA5-204ENST00000462415 ABCC8Q09428 1581 aa30.08■■■□□ 2.41
LAMA5-204ENST00000462415 CUX1P39880 1505 aa30.01■■■□□ 2.4
LAMA5-204ENST00000462415 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
LAMA5-204ENST00000462415 IFT140Q96RY7 1462 aa29.9■■■□□ 2.38
LAMA5-204ENST00000462415 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
LAMA5-204ENST00000462415 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
LAMA5-204ENST00000462415 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
LAMA5-204ENST00000462415 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
LAMA5-204ENST00000462415 WRNQ14191 1432 aaPredicted RBP eCLIP29.82■■■□□ 2.36
LAMA5-204ENST00000462415 TOP2BQ02880 1626 aa29.8■■■□□ 2.36
LAMA5-204ENST00000462415 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
LAMA5-204ENST00000462415 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
LAMA5-204ENST00000462415 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
LAMA5-204ENST00000462415 WDR97A6NE52 1622 aa29.74■■■□□ 2.35
LAMA5-204ENST00000462415 SOGA1O94964 1423 aa29.71■■■□□ 2.35
LAMA5-204ENST00000462415 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.33
LAMA5-204ENST00000462415 ABCA10Q8WWZ4 1543 aa29.56■■■□□ 2.32
LAMA5-204ENST00000462415 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
LAMA5-204ENST00000462415 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
LAMA5-204ENST00000462415 PBRM1Q86U86 1689 aa29.51■■■□□ 2.31
LAMA5-204ENST00000462415 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
LAMA5-204ENST00000462415 GRIN2BQ13224 1484 aa29.4■■■□□ 2.3
LAMA5-204ENST00000462415 CHD1O14646 1710 aa29.4■■■□□ 2.3
LAMA5-204ENST00000462415 SNAPC4Q5SXM2 1469 aa29.39■■■□□ 2.3
LAMA5-204ENST00000462415 MAGI1Q96QZ7 1491 aaPredicted RBP29.33■■■□□ 2.29
LAMA5-204ENST00000462415 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
LAMA5-204ENST00000462415 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
LAMA5-204ENST00000462415 ERICH3Q5RHP9 1530 aa29.23■■■□□ 2.27
LAMA5-204ENST00000462415 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
LAMA5-204ENST00000462415 KIF27Q86VH2 1401 aa29.17■■■□□ 2.26
LAMA5-204ENST00000462415 FBLN2P98095 1184 aa29.15■■■□□ 2.26
LAMA5-204ENST00000462415 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
LAMA5-204ENST00000462415 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
LAMA5-204ENST00000462415 FHAD1B1AJZ9 1412 aa29.07■■■□□ 2.24
LAMA5-204ENST00000462415 CUL7Q14999 1698 aa29.07■■■□□ 2.24
LAMA5-204ENST00000462415 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
LAMA5-204ENST00000462415 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
LAMA5-204ENST00000462415 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
LAMA5-204ENST00000462415 RUSC2Q8N2Y8 1516 aa28.98■■■□□ 2.23
LAMA5-204ENST00000462415 IGF1RP08069 1367 aa28.96■■■□□ 2.23
LAMA5-204ENST00000462415 CEP170Q5SW79 1584 aa28.95■■■□□ 2.22
LAMA5-204ENST00000462415 NUP160Q12769 1436 aa28.89■■■□□ 2.22
LAMA5-204ENST00000462415 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
LAMA5-204ENST00000462415 RIMBP3CA6NJZ7 1639 aa28.86■■■□□ 2.21
LAMA5-204ENST00000462415 RIMBP3BA6NNM3 1639 aa28.86■■■□□ 2.21
LAMA5-204ENST00000462415 RIMBP3Q9UFD9 1639 aa28.86■■■□□ 2.21
LAMA5-204ENST00000462415 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
LAMA5-204ENST00000462415 CARMIL1Q5VZK9 1371 aa28.82■■■□□ 2.2
LAMA5-204ENST00000462415 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
LAMA5-204ENST00000462415 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
LAMA5-204ENST00000462415 EEA1Q15075 1411 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms