RNA–Protein interactions for RNA: ENST00000523344.5

CDK16-220, Transcript of cyclin dependent kinase 16, humanhuman

TSL 5

Gene CDK16, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-220ENST00000523344 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
CDK16-220ENST00000523344 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
CDK16-220ENST00000523344 ABCC9O60706 1549 aa26.48■■□□□ 1.83
CDK16-220ENST00000523344 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
CDK16-220ENST00000523344 NACADO15069 1562 aa25.27■■□□□ 1.64
CDK16-220ENST00000523344 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
CDK16-220ENST00000523344 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
CDK16-220ENST00000523344 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
CDK16-220ENST00000523344 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.54
CDK16-220ENST00000523344 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
CDK16-220ENST00000523344 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
CDK16-220ENST00000523344 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
CDK16-220ENST00000523344 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
CDK16-220ENST00000523344 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.513e-6■■□□□ 11.9
CDK16-220ENST00000523344 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
CDK16-220ENST00000523344 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
CDK16-220ENST00000523344 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
CDK16-220ENST00000523344 CECR2Q9BXF3 1484 aa23.95■■□□□ 1.42
CDK16-220ENST00000523344 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
CDK16-220ENST00000523344 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
CDK16-220ENST00000523344 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
CDK16-220ENST00000523344 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
CDK16-220ENST00000523344 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
CDK16-220ENST00000523344 CUX2O14529 1486 aa23.08■■□□□ 1.29
CDK16-220ENST00000523344 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
CDK16-220ENST00000523344 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
CDK16-220ENST00000523344 DNAJC5Q9H3Z4 198 aa22.95■■□□□ 1.26
CDK16-220ENST00000523344 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
CDK16-220ENST00000523344 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
CDK16-220ENST00000523344 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
CDK16-220ENST00000523344 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
CDK16-220ENST00000523344 NESP48681 1621 aa22.72■■□□□ 1.23
CDK16-220ENST00000523344 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
CDK16-220ENST00000523344 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
CDK16-220ENST00000523344 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
CDK16-220ENST00000523344 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
CDK16-220ENST00000523344 WIZO95785 1651 aa22.46■■□□□ 1.19
CDK16-220ENST00000523344 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
CDK16-220ENST00000523344 WDR62O43379 1518 aa22.39■■□□□ 1.17
CDK16-220ENST00000523344 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
CDK16-220ENST00000523344 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
CDK16-220ENST00000523344 CFTRP13569 1480 aa22.27■■□□□ 1.16
CDK16-220ENST00000523344 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
CDK16-220ENST00000523344 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
CDK16-220ENST00000523344 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
CDK16-220ENST00000523344 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
CDK16-220ENST00000523344 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
CDK16-220ENST00000523344 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
CDK16-220ENST00000523344 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
CDK16-220ENST00000523344 IFT140Q96RY7 1462 aa21.87■■□□□ 1.09
CDK16-220ENST00000523344 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
CDK16-220ENST00000523344 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
CDK16-220ENST00000523344 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
CDK16-220ENST00000523344 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
CDK16-220ENST00000523344 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
CDK16-220ENST00000523344 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
CDK16-220ENST00000523344 TARBP1Q13395 1621 aaKnown RBP21.67■■□□□ 1.06
CDK16-220ENST00000523344 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
CDK16-220ENST00000523344 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
CDK16-220ENST00000523344 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
CDK16-220ENST00000523344 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
CDK16-220ENST00000523344 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
CDK16-220ENST00000523344 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
CDK16-220ENST00000523344 CHD1O14646 1710 aa21.55■■□□□ 1.04
CDK16-220ENST00000523344 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.033e-6■■□□□ 14.2
CDK16-220ENST00000523344 SOGA1O94964 1423 aa21.42■■□□□ 1.02
CDK16-220ENST00000523344 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
CDK16-220ENST00000523344 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
CDK16-220ENST00000523344 CUX1P39880 1505 aa21.39■■□□□ 1.01
CDK16-220ENST00000523344 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
CDK16-220ENST00000523344 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
CDK16-220ENST00000523344 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
CDK16-220ENST00000523344 GRIN2BQ13224 1484 aa21.32■■□□□ 1
CDK16-220ENST00000523344 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
CDK16-220ENST00000523344 ARAP1Q96P48 1450 aa21.32■■□□□ 1
CDK16-220ENST00000523344 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
CDK16-220ENST00000523344 PBRM1Q86U86 1689 aa21.29■■□□□ 1
CDK16-220ENST00000523344 SYNJ2O15056 1496 aa21.27■■□□□ 1
CDK16-220ENST00000523344 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
CDK16-220ENST00000523344 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
CDK16-220ENST00000523344 FBLN2P98095 1184 aa21.23■□□□□ 0.99
CDK16-220ENST00000523344 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
CDK16-220ENST00000523344 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
CDK16-220ENST00000523344 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
CDK16-220ENST00000523344 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
CDK16-220ENST00000523344 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
CDK16-220ENST00000523344 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
CDK16-220ENST00000523344 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
CDK16-220ENST00000523344 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
CDK16-220ENST00000523344 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
CDK16-220ENST00000523344 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
CDK16-220ENST00000523344 NUP160Q12769 1436 aa21.01■□□□□ 0.95
CDK16-220ENST00000523344 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
CDK16-220ENST00000523344 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
CDK16-220ENST00000523344 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
CDK16-220ENST00000523344 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
CDK16-220ENST00000523344 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
CDK16-220ENST00000523344 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
CDK16-220ENST00000523344 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
CDK16-220ENST00000523344 CUL7Q14999 1698 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms