RNA–Protein interactions for RNA: ENST00000418865.6

CCNL2-204, Transcript of cyclin L2, humanhuman

TSL 1 (best)

Gene CCNL2, Length 3,082 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2-204ENST00000418865 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
CCNL2-204ENST00000418865 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
CCNL2-204ENST00000418865 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
CCNL2-204ENST00000418865 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.55
CCNL2-204ENST00000418865 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
CCNL2-204ENST00000418865 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
CCNL2-204ENST00000418865 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
CCNL2-204ENST00000418865 NACADO15069 1562 aa17.92■□□□□ 0.46
CCNL2-204ENST00000418865 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
CCNL2-204ENST00000418865 ABCC9O60706 1549 aa17.86■□□□□ 0.45
CCNL2-204ENST00000418865 HRCP23327 699 aa17.76■□□□□ 0.43
CCNL2-204ENST00000418865 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
CCNL2-204ENST00000418865 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
CCNL2-204ENST00000418865 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
CCNL2-204ENST00000418865 MYT1Q01538 1121 aa17.58■□□□□ 0.4
CCNL2-204ENST00000418865 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
CCNL2-204ENST00000418865 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
CCNL2-204ENST00000418865 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
CCNL2-204ENST00000418865 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
CCNL2-204ENST00000418865 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
CCNL2-204ENST00000418865 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
CCNL2-204ENST00000418865 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
CCNL2-204ENST00000418865 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
CCNL2-204ENST00000418865 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
CCNL2-204ENST00000418865 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
CCNL2-204ENST00000418865 SLC24A1O60721 1099 aa17.12■□□□□ 0.33
CCNL2-204ENST00000418865 WIZO95785 1651 aa17.11■□□□□ 0.33
CCNL2-204ENST00000418865 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
CCNL2-204ENST00000418865 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
CCNL2-204ENST00000418865 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
CCNL2-204ENST00000418865 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
CCNL2-204ENST00000418865 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
CCNL2-204ENST00000418865 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
CCNL2-204ENST00000418865 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
CCNL2-204ENST00000418865 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.281e-14■■□□□ 11.9
CCNL2-204ENST00000418865 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
CCNL2-204ENST00000418865 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
CCNL2-204ENST00000418865 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
CCNL2-204ENST00000418865 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.25
CCNL2-204ENST00000418865 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
CCNL2-204ENST00000418865 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
CCNL2-204ENST00000418865 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
CCNL2-204ENST00000418865 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
CCNL2-204ENST00000418865 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
CCNL2-204ENST00000418865 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
CCNL2-204ENST00000418865 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
CCNL2-204ENST00000418865 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
CCNL2-204ENST00000418865 APLP2Q06481 763 aa16.43■□□□□ 0.22
CCNL2-204ENST00000418865 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
CCNL2-204ENST00000418865 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
CCNL2-204ENST00000418865 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
CCNL2-204ENST00000418865 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
CCNL2-204ENST00000418865 FAM9AQ8IZU1 332 aaPredicted RBP16.34■□□□□ 0.21
CCNL2-204ENST00000418865 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
CCNL2-204ENST00000418865 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
CCNL2-204ENST00000418865 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
CCNL2-204ENST00000418865 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
CCNL2-204ENST00000418865 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
CCNL2-204ENST00000418865 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
CCNL2-204ENST00000418865 CFTRP13569 1480 aa16.22■□□□□ 0.19
CCNL2-204ENST00000418865 EEA1Q15075 1411 aa16.2■□□□□ 0.18
CCNL2-204ENST00000418865 SOGA1O94964 1423 aa16.16■□□□□ 0.18
CCNL2-204ENST00000418865 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
CCNL2-204ENST00000418865 RUSC2Q8N2Y8 1516 aa16.11■□□□□ 0.17
CCNL2-204ENST00000418865 KIF21BO75037 1637 aa16.09■□□□□ 0.17
CCNL2-204ENST00000418865 CUX1P39880 1505 aa16.09■□□□□ 0.17
CCNL2-204ENST00000418865 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
CCNL2-204ENST00000418865 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CCNL2-204ENST00000418865 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
CCNL2-204ENST00000418865 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
CCNL2-204ENST00000418865 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
CCNL2-204ENST00000418865 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
CCNL2-204ENST00000418865 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
CCNL2-204ENST00000418865 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
CCNL2-204ENST00000418865 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
CCNL2-204ENST00000418865 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
CCNL2-204ENST00000418865 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
CCNL2-204ENST00000418865 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
CCNL2-204ENST00000418865 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
CCNL2-204ENST00000418865 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
CCNL2-204ENST00000418865 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
CCNL2-204ENST00000418865 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
CCNL2-204ENST00000418865 NESP48681 1621 aa15.83■□□□□ 0.12
CCNL2-204ENST00000418865 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
CCNL2-204ENST00000418865 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
CCNL2-204ENST00000418865 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
CCNL2-204ENST00000418865 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
CCNL2-204ENST00000418865 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
CCNL2-204ENST00000418865 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
CCNL2-204ENST00000418865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
CCNL2-204ENST00000418865 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
CCNL2-204ENST00000418865 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
CCNL2-204ENST00000418865 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
CCNL2-204ENST00000418865 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
CCNL2-204ENST00000418865 CUX2O14529 1486 aa15.7■□□□□ 0.1
CCNL2-204ENST00000418865 CLIP1P30622 1438 aa15.69■□□□□ 0.1
CCNL2-204ENST00000418865 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
CCNL2-204ENST00000418865 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
CCNL2-204ENST00000418865 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
CCNL2-204ENST00000418865 IGF1RP08069 1367 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms