RNA–Protein interactions for RNA: ENST00000428400.5

CDK16-203, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 3,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-203ENST00000428400 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.6
CDK16-203ENST00000428400 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
CDK16-203ENST00000428400 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
CDK16-203ENST00000428400 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
CDK16-203ENST00000428400 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
CDK16-203ENST00000428400 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
CDK16-203ENST00000428400 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
CDK16-203ENST00000428400 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.84
CDK16-203ENST00000428400 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
CDK16-203ENST00000428400 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
CDK16-203ENST00000428400 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
CDK16-203ENST00000428400 ABCC9O60706 1549 aa20■□□□□ 0.79
CDK16-203ENST00000428400 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
CDK16-203ENST00000428400 LOC105371045A0A1W2PR82 267 aa19.81■□□□□ 0.76
CDK16-203ENST00000428400 HRCP23327 699 aa19.73■□□□□ 0.75
CDK16-203ENST00000428400 NACADO15069 1562 aa19.71■□□□□ 0.75
CDK16-203ENST00000428400 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
CDK16-203ENST00000428400 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
CDK16-203ENST00000428400 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
CDK16-203ENST00000428400 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
CDK16-203ENST00000428400 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
CDK16-203ENST00000428400 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
CDK16-203ENST00000428400 MYT1Q01538 1121 aa19.48■□□□□ 0.71
CDK16-203ENST00000428400 WIZO95785 1651 aa19.47■□□□□ 0.71
CDK16-203ENST00000428400 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
CDK16-203ENST00000428400 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
CDK16-203ENST00000428400 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
CDK16-203ENST00000428400 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
CDK16-203ENST00000428400 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
CDK16-203ENST00000428400 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
CDK16-203ENST00000428400 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.653e-6■■□□□ 11.9
CDK16-203ENST00000428400 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
CDK16-203ENST00000428400 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
CDK16-203ENST00000428400 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
CDK16-203ENST00000428400 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
CDK16-203ENST00000428400 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
CDK16-203ENST00000428400 SMARCA2P51531 1590 aa19■□□□□ 0.63
CDK16-203ENST00000428400 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
CDK16-203ENST00000428400 SOGA1O94964 1423 aa18.83■□□□□ 0.6
CDK16-203ENST00000428400 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.59
CDK16-203ENST00000428400 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
CDK16-203ENST00000428400 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
CDK16-203ENST00000428400 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
CDK16-203ENST00000428400 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
CDK16-203ENST00000428400 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
CDK16-203ENST00000428400 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
CDK16-203ENST00000428400 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
CDK16-203ENST00000428400 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
CDK16-203ENST00000428400 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
CDK16-203ENST00000428400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
CDK16-203ENST00000428400 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
CDK16-203ENST00000428400 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
CDK16-203ENST00000428400 EEA1Q15075 1411 aa18.55■□□□□ 0.56
CDK16-203ENST00000428400 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
CDK16-203ENST00000428400 CCER1Q8TC90 406 aaPredicted RBP18.5■□□□□ 0.55
CDK16-203ENST00000428400 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
CDK16-203ENST00000428400 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
CDK16-203ENST00000428400 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
CDK16-203ENST00000428400 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
CDK16-203ENST00000428400 KIF21BO75037 1637 aa18.36■□□□□ 0.53
CDK16-203ENST00000428400 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
CDK16-203ENST00000428400 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
CDK16-203ENST00000428400 CLIP1P30622 1438 aa18.33■□□□□ 0.53
CDK16-203ENST00000428400 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
CDK16-203ENST00000428400 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
CDK16-203ENST00000428400 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
CDK16-203ENST00000428400 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
CDK16-203ENST00000428400 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
CDK16-203ENST00000428400 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
CDK16-203ENST00000428400 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
CDK16-203ENST00000428400 CUX1P39880 1505 aa18.19■□□□□ 0.5
CDK16-203ENST00000428400 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
CDK16-203ENST00000428400 APLP2Q06481 763 aa18.16■□□□□ 0.5
CDK16-203ENST00000428400 CFTRP13569 1480 aa18.11■□□□□ 0.49
CDK16-203ENST00000428400 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
CDK16-203ENST00000428400 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
CDK16-203ENST00000428400 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
CDK16-203ENST00000428400 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
CDK16-203ENST00000428400 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
CDK16-203ENST00000428400 PRKCSHP14314 528 aaPredicted RBP18.01■□□□□ 0.47
CDK16-203ENST00000428400 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
CDK16-203ENST00000428400 CUX2O14529 1486 aa17.95■□□□□ 0.46
CDK16-203ENST00000428400 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
CDK16-203ENST00000428400 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
CDK16-203ENST00000428400 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
CDK16-203ENST00000428400 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
CDK16-203ENST00000428400 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
CDK16-203ENST00000428400 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
CDK16-203ENST00000428400 IGF1RP08069 1367 aa17.88■□□□□ 0.45
CDK16-203ENST00000428400 ITGAEP38570 1179 aa17.82■□□□□ 0.44
CDK16-203ENST00000428400 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
CDK16-203ENST00000428400 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CDK16-203ENST00000428400 NESP48681 1621 aa17.78■□□□□ 0.44
CDK16-203ENST00000428400 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
CDK16-203ENST00000428400 DHX57Q6P158 1386 aaKnown RBP17.76■□□□□ 0.43
CDK16-203ENST00000428400 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
CDK16-203ENST00000428400 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
CDK16-203ENST00000428400 RRBP1Q9P2E9 1410 aaKnown RBP17.75■□□□□ 0.43
CDK16-203ENST00000428400 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
CDK16-203ENST00000428400 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms