RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
SNRNP200-205ENST00000480835 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
SNRNP200-205ENST00000480835 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
SNRNP200-205ENST00000480835 ABCC9O60706 1549 aa28.37■■■□□ 2.13
SNRNP200-205ENST00000480835 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
SNRNP200-205ENST00000480835 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
SNRNP200-205ENST00000480835 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
SNRNP200-205ENST00000480835 NACADO15069 1562 aa27.95■■■□□ 2.07
SNRNP200-205ENST00000480835 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
SNRNP200-205ENST00000480835 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
SNRNP200-205ENST00000480835 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
SNRNP200-205ENST00000480835 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
SNRNP200-205ENST00000480835 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
SNRNP200-205ENST00000480835 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.857e-8■■□□□ 11.9
SNRNP200-205ENST00000480835 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
SNRNP200-205ENST00000480835 BAZ1AQ9NRL2 1556 aaPredicted RBP26.4■■□□□ 1.82
SNRNP200-205ENST00000480835 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
SNRNP200-205ENST00000480835 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
SNRNP200-205ENST00000480835 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
SNRNP200-205ENST00000480835 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
SNRNP200-205ENST00000480835 WIZO95785 1651 aa26.08■■□□□ 1.77
SNRNP200-205ENST00000480835 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
SNRNP200-205ENST00000480835 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
SNRNP200-205ENST00000480835 SMARCA2P51531 1590 aa25.95■■□□□ 1.74
SNRNP200-205ENST00000480835 ATAD2BQ9ULI0 1458 aa25.89■■□□□ 1.73
SNRNP200-205ENST00000480835 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
SNRNP200-205ENST00000480835 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
SNRNP200-205ENST00000480835 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
SNRNP200-205ENST00000480835 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
SNRNP200-205ENST00000480835 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
SNRNP200-205ENST00000480835 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
SNRNP200-205ENST00000480835 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
SNRNP200-205ENST00000480835 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.62
SNRNP200-205ENST00000480835 CFTRP13569 1480 aa25.09■■□□□ 1.61
SNRNP200-205ENST00000480835 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
SNRNP200-205ENST00000480835 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
SNRNP200-205ENST00000480835 LAMC3Q9Y6N6 1575 aa24.95■■□□□ 1.58
SNRNP200-205ENST00000480835 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
SNRNP200-205ENST00000480835 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
SNRNP200-205ENST00000480835 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
SNRNP200-205ENST00000480835 NESP48681 1621 aa24.81■■□□□ 1.56
SNRNP200-205ENST00000480835 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
SNRNP200-205ENST00000480835 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
SNRNP200-205ENST00000480835 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
SNRNP200-205ENST00000480835 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
SNRNP200-205ENST00000480835 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
SNRNP200-205ENST00000480835 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.54
SNRNP200-205ENST00000480835 CUX1P39880 1505 aa24.62■■□□□ 1.53
SNRNP200-205ENST00000480835 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
SNRNP200-205ENST00000480835 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
SNRNP200-205ENST00000480835 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
SNRNP200-205ENST00000480835 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
SNRNP200-205ENST00000480835 EEA1Q15075 1411 aa24.43■■□□□ 1.5
SNRNP200-205ENST00000480835 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
SNRNP200-205ENST00000480835 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
SNRNP200-205ENST00000480835 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
SNRNP200-205ENST00000480835 SOGA1O94964 1423 aa24.35■■□□□ 1.49
SNRNP200-205ENST00000480835 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
SNRNP200-205ENST00000480835 WDR62O43379 1518 aa24.3■■□□□ 1.48
SNRNP200-205ENST00000480835 FAM9AQ8IZU1 332 aaPredicted RBP24.28■■□□□ 1.48
SNRNP200-205ENST00000480835 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
SNRNP200-205ENST00000480835 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
SNRNP200-205ENST00000480835 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
SNRNP200-205ENST00000480835 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
SNRNP200-205ENST00000480835 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.46
SNRNP200-205ENST00000480835 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
SNRNP200-205ENST00000480835 CUX2O14529 1486 aa24.19■■□□□ 1.46
SNRNP200-205ENST00000480835 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
SNRNP200-205ENST00000480835 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
SNRNP200-205ENST00000480835 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
SNRNP200-205ENST00000480835 KIF21BO75037 1637 aa24.09■■□□□ 1.45
SNRNP200-205ENST00000480835 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
SNRNP200-205ENST00000480835 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
SNRNP200-205ENST00000480835 GOLGA3Q08378 1498 aa24■■□□□ 1.43
SNRNP200-205ENST00000480835 PRXQ9BXM0 1461 aa24■■□□□ 1.43
SNRNP200-205ENST00000480835 IGF1RP08069 1367 aa23.99■■□□□ 1.43
SNRNP200-205ENST00000480835 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
SNRNP200-205ENST00000480835 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
SNRNP200-205ENST00000480835 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
SNRNP200-205ENST00000480835 CUL7Q14999 1698 aa23.94■■□□□ 1.42
SNRNP200-205ENST00000480835 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
SNRNP200-205ENST00000480835 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
SNRNP200-205ENST00000480835 TNIKQ9UKE5 1360 aa23.89■■□□□ 1.41
SNRNP200-205ENST00000480835 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
SNRNP200-205ENST00000480835 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
SNRNP200-205ENST00000480835 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
SNRNP200-205ENST00000480835 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.414e-6■■■■□ 20.3
SNRNP200-205ENST00000480835 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
SNRNP200-205ENST00000480835 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
SNRNP200-205ENST00000480835 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
SNRNP200-205ENST00000480835 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
SNRNP200-205ENST00000480835 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
SNRNP200-205ENST00000480835 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
SNRNP200-205ENST00000480835 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
SNRNP200-205ENST00000480835 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
SNRNP200-205ENST00000480835 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
SNRNP200-205ENST00000480835 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
SNRNP200-205ENST00000480835 CLIP1P30622 1438 aa23.58■■□□□ 1.36
SNRNP200-205ENST00000480835 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
SNRNP200-205ENST00000480835 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms