Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
MRPL54Q6P161 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 KRT18P24-201ENST00000344739 1156 ntBASIC15.57■□□□□ 0.08
MRPL54Q6P161 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MRPL54Q6P161 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MRPL54Q6P161 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 AC139795.1-202ENST00000500444 432 ntBASIC15.56■□□□□ 0.08
MRPL54Q6P161 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 AL162377.1-201ENST00000618844 1793 ntBASIC15.56■□□□□ 0.08
MRPL54Q6P161 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 TNXA-203ENST00000507684 2038 ntBASIC15.56■□□□□ 0.08
MRPL54Q6P161 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPL54Q6P161 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MRPL54Q6P161 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPL54Q6P161 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPL54Q6P161 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MRPL54Q6P161 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MRPL54Q6P161 AC121338.2-201ENST00000622535 1744 ntBASIC15.54■□□□□ 0.08
MRPL54Q6P161 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MRPL54Q6P161 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MRPL54Q6P161 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MRPL54Q6P161 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms