RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
PDZD3-201ENST00000322712 CCDC180Q9P1Z9 1646 aa38.22■■■■□ 3.71
PDZD3-201ENST00000322712 ZCCHC6Q5VYS8 1495 aaKnown RBP37.03■■■■□ 3.52
PDZD3-201ENST00000322712 SHROOM4Q9ULL8 1493 aa36.75■■■■□ 3.47
PDZD3-201ENST00000322712 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
PDZD3-201ENST00000322712 ABCC9O60706 1549 aa36.36■■■■□ 3.41
PDZD3-201ENST00000322712 DCAF1Q9Y4B6 1507 aa36.17■■■■□ 3.38
PDZD3-201ENST00000322712 MYO15BQ96JP2 1530 aa35.74■■■■□ 3.31
PDZD3-201ENST00000322712 NACADO15069 1562 aa35.62■■■■□ 3.29
PDZD3-201ENST00000322712 SUPT5HO00267 1087 aaKnown RBP35.61■■■■□ 3.29
PDZD3-201ENST00000322712 RB1CC1Q8TDY2 1594 aa35.36■■■■□ 3.25
PDZD3-201ENST00000322712 SCRIBQ14160 1630 aa35.29■■■■□ 3.24
PDZD3-201ENST00000322712 UNC13AQ9UPW8 1703 aa34.72■■■■□ 3.15
PDZD3-201ENST00000322712 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
PDZD3-201ENST00000322712 CECR2Q9BXF3 1484 aa34.35■■■■□ 3.09
PDZD3-201ENST00000322712 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
PDZD3-201ENST00000322712 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
PDZD3-201ENST00000322712 CHIC1Q5VXU3 224 aa34.23■■■■□ 3.07
PDZD3-201ENST00000322712 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
PDZD3-201ENST00000322712 WIZO95785 1651 aa33.92■■■■□ 3.02
PDZD3-201ENST00000322712 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
PDZD3-201ENST00000322712 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
PDZD3-201ENST00000322712 TOP2AP11388 1531 aaKnown RBP33.37■■■□□ 2.93
PDZD3-201ENST00000322712 EIF4G1Q04637 1599 aaKnown RBP33.31■■■□□ 2.92
PDZD3-201ENST00000322712 PEG3Q9GZU2 1588 aa33.27■■■□□ 2.92
PDZD3-201ENST00000322712 TRIM41Q8WV44 630 aa33.26■■■□□ 2.91
PDZD3-201ENST00000322712 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
PDZD3-201ENST00000322712 ATAD2BQ9ULI0 1458 aa33.2■■■□□ 2.91
PDZD3-201ENST00000322712 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
PDZD3-201ENST00000322712 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
PDZD3-201ENST00000322712 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
PDZD3-201ENST00000322712 FAM9AQ8IZU1 332 aaPredicted RBP32.93■■■□□ 2.86
PDZD3-201ENST00000322712 NCAPD3P42695 1498 aa32.88■■■□□ 2.85
PDZD3-201ENST00000322712 CC2D2AQ9P2K1 1620 aa32.85■■■□□ 2.85
PDZD3-201ENST00000322712 HMGXB3Q12766 1538 aa32.83■■■□□ 2.85
PDZD3-201ENST00000322712 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
PDZD3-201ENST00000322712 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
PDZD3-201ENST00000322712 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
PDZD3-201ENST00000322712 SOGA1O94964 1423 aa32.33■■■□□ 2.77
PDZD3-201ENST00000322712 SYNJ1O43426 1573 aa32.27■■■□□ 2.76
PDZD3-201ENST00000322712 RUSC2Q8N2Y8 1516 aa32.22■■■□□ 2.75
PDZD3-201ENST00000322712 PCGF6Q9BYE7 350 aa32.21■■■□□ 2.75
PDZD3-201ENST00000322712 CFTRP13569 1480 aa32.17■■■□□ 2.74
PDZD3-201ENST00000322712 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.73
PDZD3-201ENST00000322712 CADPSQ9ULU8 1353 aa32.08■■■□□ 2.73
PDZD3-201ENST00000322712 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
PDZD3-201ENST00000322712 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
PDZD3-201ENST00000322712 EEA1Q15075 1411 aa31.99■■■□□ 2.71
PDZD3-201ENST00000322712 TOP2BQ02880 1626 aa31.95■■■□□ 2.71
PDZD3-201ENST00000322712 NESP48681 1621 aa31.9■■■□□ 2.7
PDZD3-201ENST00000322712 BIVM-ERCC5R4GMW8 1640 aa31.86■■■□□ 2.69
PDZD3-201ENST00000322712 CUX1P39880 1505 aa31.85■■■□□ 2.69
PDZD3-201ENST00000322712 TRIM26Q12899 539 aaPredicted RBP31.81■■■□□ 2.68
PDZD3-201ENST00000322712 UBTFP17480 764 aaKnown RBP31.8■■■□□ 2.68
PDZD3-201ENST00000322712 LAMC3Q9Y6N6 1575 aa31.79■■■□□ 2.68
PDZD3-201ENST00000322712 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.67
PDZD3-201ENST00000322712 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
PDZD3-201ENST00000322712 CEP162Q5TB80 1403 aa31.74■■■□□ 2.67
PDZD3-201ENST00000322712 GOLGA3Q08378 1498 aa31.73■■■□□ 2.67
PDZD3-201ENST00000322712 PPARGC1BQ86YN6 1023 aaKnown RBP31.71■■■□□ 2.67
PDZD3-201ENST00000322712 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
PDZD3-201ENST00000322712 KIF21BO75037 1637 aa31.63■■■□□ 2.65
PDZD3-201ENST00000322712 RAPGEF2Q9Y4G8 1499 aa31.58■■■□□ 2.65
PDZD3-201ENST00000322712 HRCP23327 699 aa31.58■■■□□ 2.65
PDZD3-201ENST00000322712 PDS5BQ9NTI5 1447 aa31.57■■■□□ 2.64
PDZD3-201ENST00000322712 KIF21AQ7Z4S6 1674 aa31.5■■■□□ 2.63
PDZD3-201ENST00000322712 KIF27Q86VH2 1401 aa31.44■■■□□ 2.62
PDZD3-201ENST00000322712 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
PDZD3-201ENST00000322712 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
PDZD3-201ENST00000322712 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
PDZD3-201ENST00000322712 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
PDZD3-201ENST00000322712 PRXQ9BXM0 1461 aa31.39■■■□□ 2.62
PDZD3-201ENST00000322712 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
PDZD3-201ENST00000322712 TTBK1Q5TCY1 1321 aaPredicted RBP31.36■■■□□ 2.61
PDZD3-201ENST00000322712 CUX2O14529 1486 aa31.34■■■□□ 2.61
PDZD3-201ENST00000322712 CLIP1P30622 1438 aa31.34■■■□□ 2.61
PDZD3-201ENST00000322712 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
PDZD3-201ENST00000322712 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.59
PDZD3-201ENST00000322712 IGF1RP08069 1367 aa31.21■■■□□ 2.59
PDZD3-201ENST00000322712 RAD54L2Q9Y4B4 1467 aa31.2■■■□□ 2.58
PDZD3-201ENST00000322712 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
PDZD3-201ENST00000322712 MRC2Q9UBG0 1479 aa31.16■■■□□ 2.58
PDZD3-201ENST00000322712 VPS8Q8N3P4 1428 aa31.09■■■□□ 2.57
PDZD3-201ENST00000322712 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
PDZD3-201ENST00000322712 CARMIL1Q5VZK9 1371 aa31.04■■■□□ 2.56
PDZD3-201ENST00000322712 WDR62O43379 1518 aa30.99■■■□□ 2.55
PDZD3-201ENST00000322712 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
PDZD3-201ENST00000322712 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
PDZD3-201ENST00000322712 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
PDZD3-201ENST00000322712 TARBP1Q13395 1621 aaKnown RBP30.92■■■□□ 2.54
PDZD3-201ENST00000322712 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
PDZD3-201ENST00000322712 ARHGAP35Q9NRY4 1499 aa30.85■■■□□ 2.53
PDZD3-201ENST00000322712 APLP2Q06481 763 aa30.85■■■□□ 2.53
PDZD3-201ENST00000322712 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
PDZD3-201ENST00000322712 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
PDZD3-201ENST00000322712 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
PDZD3-201ENST00000322712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.75■■■□□ 2.51
PDZD3-201ENST00000322712 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.51
PDZD3-201ENST00000322712 CUL7Q14999 1698 aa30.71■■■□□ 2.51
PDZD3-201ENST00000322712 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms