RNA–Protein interactions for RNA: ENST00000613231.1

NKILA-201, NF-kappaB interacting lncRNA, humanhuman

TSL 4 BASIC

Gene NKILA, Length 537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKILA-201ENST00000613231 NISCHQ9Y2I1 1504 aa53.73■■■■■ 6.19
NKILA-201ENST00000613231 CCDC180Q9P1Z9 1646 aa47.59■■■■■ 5.21
NKILA-201ENST00000613231 ABCC9O60706 1549 aa46.13■■■■■ 4.98
NKILA-201ENST00000613231 ZCCHC6Q5VYS8 1495 aaKnown RBP44.85■■■■■ 4.77
NKILA-201ENST00000613231 DCAF8L2P0C7V8 631 aa44.8■■■■■ 4.76
NKILA-201ENST00000613231 NACADO15069 1562 aa44.56■■■■■ 4.72
NKILA-201ENST00000613231 RB1CC1Q8TDY2 1594 aa44.53■■■■■ 4.72
NKILA-201ENST00000613231 DCAF1Q9Y4B6 1507 aa44.39■■■■■ 4.7
NKILA-201ENST00000613231 MYO15BQ96JP2 1530 aa44.34■■■■■ 4.69
NKILA-201ENST00000613231 UNC13AQ9UPW8 1703 aa43.75■■■■■ 4.59
NKILA-201ENST00000613231 SCRIBQ14160 1630 aa43.56■■■■■ 4.56
NKILA-201ENST00000613231 BICRAQ9NZM4 1560 aa43.21■■■■■ 4.51
NKILA-201ENST00000613231 PABPN1Q86U42 306 aaKnown RBP eCLIP43.19■■■■■ 4.5
NKILA-201ENST00000613231 SHROOM4Q9ULL8 1493 aa42.9■■■■■ 4.46
NKILA-201ENST00000613231 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
NKILA-201ENST00000613231 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
NKILA-201ENST00000613231 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
NKILA-201ENST00000613231 CC2D2AQ9P2K1 1620 aa41.76■■■■■ 4.28
NKILA-201ENST00000613231 SMARCA4P51532 1647 aa41.65■■■■■ 4.26
NKILA-201ENST00000613231 BAZ1AQ9NRL2 1556 aaPredicted RBP41.6■■■■■ 4.25
NKILA-201ENST00000613231 MROH2BQ7Z745 1585 aa41.48■■■■■ 4.23
NKILA-201ENST00000613231 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
NKILA-201ENST00000613231 SMARCA2P51531 1590 aa41.19■■■■■ 4.18
NKILA-201ENST00000613231 WIZO95785 1651 aa41.14■■■■■ 4.18
NKILA-201ENST00000613231 PEG3Q9GZU2 1588 aa41.13■■■■■ 4.18
NKILA-201ENST00000613231 RSF1Q96T23 1441 aaPredicted RBP41.12■■■■■ 4.17
NKILA-201ENST00000613231 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
NKILA-201ENST00000613231 HMGXB3Q12766 1538 aa40.95■■■■■ 4.15
NKILA-201ENST00000613231 BAZ1BQ9UIG0 1483 aaKnown RBP40.94■■■■■ 4.14
NKILA-201ENST00000613231 TOP2AP11388 1531 aaKnown RBP40.62■■■■■ 4.09
NKILA-201ENST00000613231 SUPT5HO00267 1087 aaKnown RBP40.58■■■■■ 4.09
NKILA-201ENST00000613231 CCDC88BA6NC98 1476 aa40.15■■■■■ 4.02
NKILA-201ENST00000613231 NESP48681 1621 aa40.09■■■■■ 4.01
NKILA-201ENST00000613231 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
NKILA-201ENST00000613231 CADPSQ9ULU8 1353 aa39.92■■■■□ 3.98
NKILA-201ENST00000613231 CFTRP13569 1480 aa39.79■■■■□ 3.96
NKILA-201ENST00000613231 PRDM2Q13029 1718 aa39.75■■■■□ 3.95
NKILA-201ENST00000613231 KIF21AQ7Z4S6 1674 aa39.71■■■■□ 3.95
NKILA-201ENST00000613231 ERCC6Q03468 1493 aa39.68■■■■□ 3.94
NKILA-201ENST00000613231 PDS5BQ9NTI5 1447 aa39.64■■■■□ 3.94
NKILA-201ENST00000613231 FANCD2Q9BXW9 1451 aa39.52■■■■□ 3.92
NKILA-201ENST00000613231 CEP164Q9UPV0 1460 aa39.42■■■■□ 3.9
NKILA-201ENST00000613231 THOC2Q8NI27 1593 aaKnown RBP39.35■■■■□ 3.89
NKILA-201ENST00000613231 MRC2Q9UBG0 1479 aa39.25■■■■□ 3.87
NKILA-201ENST00000613231 URB2Q14146 1524 aaKnown RBP39.12■■■■□ 3.85
NKILA-201ENST00000613231 WDR62O43379 1518 aa39.1■■■■□ 3.85
NKILA-201ENST00000613231 CUX2O14529 1486 aa38.99■■■■□ 3.83
NKILA-201ENST00000613231 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
NKILA-201ENST00000613231 TOPBP1Q92547 1522 aa38.96■■■■□ 3.83
NKILA-201ENST00000613231 ABCC8Q09428 1581 aa38.94■■■■□ 3.82
NKILA-201ENST00000613231 CUX1P39880 1505 aa38.88■■■■□ 3.81
NKILA-201ENST00000613231 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
NKILA-201ENST00000613231 SYNJ1O43426 1573 aa38.74■■■■□ 3.79
NKILA-201ENST00000613231 BIVM-ERCC5R4GMW8 1640 aa38.7■■■■□ 3.79
NKILA-201ENST00000613231 TOP2BQ02880 1626 aa38.67■■■■□ 3.78
NKILA-201ENST00000613231 FGD5Q6ZNL6 1462 aa38.66■■■■□ 3.78
NKILA-201ENST00000613231 POLA1P09884 1462 aaPredicted RBP38.65■■■■□ 3.78
NKILA-201ENST00000613231 IFT140Q96RY7 1462 aa38.54■■■■□ 3.76
NKILA-201ENST00000613231 RAD54L2Q9Y4B4 1467 aa38.53■■■■□ 3.76
NKILA-201ENST00000613231 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
NKILA-201ENST00000613231 SOGA1O94964 1423 aa38.49■■■■□ 3.75
NKILA-201ENST00000613231 ZNF608Q9ULD9 1512 aaPredicted RBP38.4■■■■□ 3.74
NKILA-201ENST00000613231 WDR97A6NE52 1622 aa38.38■■■■□ 3.74
NKILA-201ENST00000613231 EIF4G3O43432 1585 aaKnown RBP38.3■■■■□ 3.72
NKILA-201ENST00000613231 ABCA10Q8WWZ4 1543 aa38.25■■■■□ 3.71
NKILA-201ENST00000613231 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.71
NKILA-201ENST00000613231 TDRD9Q8NDG6 1382 aaKnown RBP38.24■■■■□ 3.71
NKILA-201ENST00000613231 TRIM41Q8WV44 630 aa38.22■■■■□ 3.71
NKILA-201ENST00000613231 ABCA5Q8WWZ7 1642 aa38.12■■■■□ 3.69
NKILA-201ENST00000613231 PBRM1Q86U86 1689 aa38.11■■■■□ 3.69
NKILA-201ENST00000613231 CHIC1Q5VXU3 224 aa38.1■■■■□ 3.69
NKILA-201ENST00000613231 GAPVD1Q14C86 1478 aa38.06■■■■□ 3.68
NKILA-201ENST00000613231 GRIN2BQ13224 1484 aa37.96■■■■□ 3.67
NKILA-201ENST00000613231 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
NKILA-201ENST00000613231 KIF27Q86VH2 1401 aa37.89■■■■□ 3.66
NKILA-201ENST00000613231 RUSC2Q8N2Y8 1516 aa37.83■■■■□ 3.65
NKILA-201ENST00000613231 CHD1O14646 1710 aa37.83■■■■□ 3.65
NKILA-201ENST00000613231 ERICH3Q5RHP9 1530 aa37.8■■■■□ 3.64
NKILA-201ENST00000613231 MAGI1Q96QZ7 1491 aaPredicted RBP37.79■■■■□ 3.64
NKILA-201ENST00000613231 ADAMTS12P58397 1594 aa37.72■■■■□ 3.63
NKILA-201ENST00000613231 FBLN2P98095 1184 aa37.71■■■■□ 3.63
NKILA-201ENST00000613231 IGF1RP08069 1367 aa37.68■■■■□ 3.62
NKILA-201ENST00000613231 SYNJ2O15056 1496 aa37.65■■■■□ 3.62
NKILA-201ENST00000613231 CUL7Q14999 1698 aa37.63■■■■□ 3.61
NKILA-201ENST00000613231 CHMP7Q8WUX9 453 aaPredicted RBP37.62■■■■□ 3.61
NKILA-201ENST00000613231 FHAD1B1AJZ9 1412 aa37.6■■■■□ 3.61
NKILA-201ENST00000613231 FAM9AQ8IZU1 332 aaPredicted RBP37.54■■■■□ 3.6
NKILA-201ENST00000613231 GRIN2AQ12879 1464 aa37.5■■■■□ 3.59
NKILA-201ENST00000613231 OSCARQ8IYS5 282 aa37.49■■■■□ 3.59
NKILA-201ENST00000613231 CARMIL1Q5VZK9 1371 aa37.48■■■■□ 3.59
NKILA-201ENST00000613231 EEA1Q15075 1411 aa37.45■■■■□ 3.59
NKILA-201ENST00000613231 CSRNP3Q8WYN3 585 aa37.4■■■■□ 3.58
NKILA-201ENST00000613231 CEP170Q5SW79 1584 aa37.35■■■■□ 3.57
NKILA-201ENST00000613231 RAPGEF2Q9Y4G8 1499 aa37.33■■■■□ 3.57
NKILA-201ENST00000613231 PRXQ9BXM0 1461 aa37.28■■■■□ 3.56
NKILA-201ENST00000613231 NUP160Q12769 1436 aa37.27■■■■□ 3.56
NKILA-201ENST00000613231 CLASP1Q7Z460 1538 aa37.26■■■■□ 3.56
NKILA-201ENST00000613231 DNAJC5Q9H3Z4 198 aa37.21■■■■□ 3.55
NKILA-201ENST00000613231 KIF21BO75037 1637 aa37.14■■■■□ 3.54
NKILA-201ENST00000613231 CTTNBP2Q8WZ74 1663 aa37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms