RNA–Protein interactions for RNA: ENST00000507684.1

TNXA-203, Transcript of tenascin XA (pseudogene), humanhuman

BASIC

Gene TNXA, Length 2,038 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXA-203ENST00000507684 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
TNXA-203ENST00000507684 CCDC180Q9P1Z9 1646 aa33.81■■■■□ 3
TNXA-203ENST00000507684 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
TNXA-203ENST00000507684 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
TNXA-203ENST00000507684 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
TNXA-203ENST00000507684 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
TNXA-203ENST00000507684 DCAF8L2P0C7V8 631 aa32.36■■■□□ 2.77
TNXA-203ENST00000507684 CHIC1Q5VXU3 224 aa32.3■■■□□ 2.76
TNXA-203ENST00000507684 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
TNXA-203ENST00000507684 ABCC9O60706 1549 aa31.78■■■□□ 2.68
TNXA-203ENST00000507684 HRCP23327 699 aa31.65■■■□□ 2.66
TNXA-203ENST00000507684 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
TNXA-203ENST00000507684 PCGF6Q9BYE7 350 aa31.36■■■□□ 2.61
TNXA-203ENST00000507684 RSF1Q96T23 1441 aaPredicted RBP31.34■■■□□ 2.61
TNXA-203ENST00000507684 LOC105371045A0A1W2PR82 267 aa31.19■■■□□ 2.58
TNXA-203ENST00000507684 RB1CC1Q8TDY2 1594 aa31.15■■■□□ 2.58
TNXA-203ENST00000507684 NACADO15069 1562 aa31.12■■■□□ 2.57
TNXA-203ENST00000507684 TRIM26Q12899 539 aaPredicted RBP30.89■■■□□ 2.54
TNXA-203ENST00000507684 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
TNXA-203ENST00000507684 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
TNXA-203ENST00000507684 PPARGC1BQ86YN6 1023 aaKnown RBP30.74■■■□□ 2.51
TNXA-203ENST00000507684 MROH2BQ7Z745 1585 aa30.73■■■□□ 2.51
TNXA-203ENST00000507684 WIZO95785 1651 aa30.6■■■□□ 2.49
TNXA-203ENST00000507684 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
TNXA-203ENST00000507684 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
TNXA-203ENST00000507684 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
TNXA-203ENST00000507684 ZEB1P37275 1124 aaPredicted RBP30.4■■■□□ 2.46
TNXA-203ENST00000507684 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
TNXA-203ENST00000507684 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
TNXA-203ENST00000507684 UNC13AQ9UPW8 1703 aa30.11■■■□□ 2.41
TNXA-203ENST00000507684 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
TNXA-203ENST00000507684 EHMT2Q96KQ7 1210 aa30.01■■■□□ 2.39
TNXA-203ENST00000507684 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
TNXA-203ENST00000507684 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
TNXA-203ENST00000507684 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.36
TNXA-203ENST00000507684 EEA1Q15075 1411 aa29.75■■■□□ 2.35
TNXA-203ENST00000507684 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
TNXA-203ENST00000507684 CEP162Q5TB80 1403 aa29.66■■■□□ 2.34
TNXA-203ENST00000507684 BICRAQ9NZM4 1560 aa29.66■■■□□ 2.34
TNXA-203ENST00000507684 TNIKQ9UKE5 1360 aa29.65■■■□□ 2.34
TNXA-203ENST00000507684 SOGA1O94964 1423 aa29.63■■■□□ 2.33
TNXA-203ENST00000507684 CSRNP3Q8WYN3 585 aa29.49■■■□□ 2.31
TNXA-203ENST00000507684 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
TNXA-203ENST00000507684 CCER1Q8TC90 406 aaPredicted RBP29.47■■■□□ 2.31
TNXA-203ENST00000507684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.46■■■□□ 2.31
TNXA-203ENST00000507684 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
TNXA-203ENST00000507684 KIF21BO75037 1637 aa29.35■■■□□ 2.29
TNXA-203ENST00000507684 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
TNXA-203ENST00000507684 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
TNXA-203ENST00000507684 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
TNXA-203ENST00000507684 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
TNXA-203ENST00000507684 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
TNXA-203ENST00000507684 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
TNXA-203ENST00000507684 SCAF1Q9H7N4 1312 aaKnown RBP29.17■■■□□ 2.26
TNXA-203ENST00000507684 TTBK1Q5TCY1 1321 aaPredicted RBP29.15■■■□□ 2.26
TNXA-203ENST00000507684 CLIP1P30622 1438 aa29.07■■■□□ 2.24
TNXA-203ENST00000507684 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
TNXA-203ENST00000507684 VPS8Q8N3P4 1428 aa29.02■■■□□ 2.24
TNXA-203ENST00000507684 DIEXFQ68CQ4 756 aaKnown RBP29.01■■■□□ 2.23
TNXA-203ENST00000507684 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
TNXA-203ENST00000507684 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
TNXA-203ENST00000507684 RAPGEF2Q9Y4G8 1499 aa28.95■■■□□ 2.22
TNXA-203ENST00000507684 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
TNXA-203ENST00000507684 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
TNXA-203ENST00000507684 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
TNXA-203ENST00000507684 ZNF316A6NFI3 1004 aaPredicted RBP28.81■■■□□ 2.2
TNXA-203ENST00000507684 CENPBP07199 599 aaPredicted RBP28.79■■■□□ 2.2
TNXA-203ENST00000507684 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
TNXA-203ENST00000507684 APLP2Q06481 763 aa28.76■■■□□ 2.19
TNXA-203ENST00000507684 PRXQ9BXM0 1461 aa28.75■■■□□ 2.19
TNXA-203ENST00000507684 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
TNXA-203ENST00000507684 HNRNPUL2Q1KMD3 747 aaKnown RBP28.7■■■□□ 2.18
TNXA-203ENST00000507684 CUX1P39880 1505 aa28.63■■■□□ 2.17
TNXA-203ENST00000507684 ARAP1Q96P48 1450 aa28.62■■■□□ 2.17
TNXA-203ENST00000507684 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
TNXA-203ENST00000507684 CFTRP13569 1480 aa28.54■■■□□ 2.16
TNXA-203ENST00000507684 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
TNXA-203ENST00000507684 GTF3C3Q9Y5Q9 886 aa28.5■■■□□ 2.15
TNXA-203ENST00000507684 CLSPNQ9HAW4 1339 aa28.49■■■□□ 2.15
TNXA-203ENST00000507684 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
TNXA-203ENST00000507684 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
TNXA-203ENST00000507684 DHX57Q6P158 1386 aaKnown RBP28.36■■■□□ 2.13
TNXA-203ENST00000507684 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
TNXA-203ENST00000507684 CUX2O14529 1486 aa28.32■■■□□ 2.12
TNXA-203ENST00000507684 MIER1Q8N108 512 aa28.31■■■□□ 2.12
TNXA-203ENST00000507684 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
TNXA-203ENST00000507684 MAP3K1Q13233 1512 aa28.2■■■□□ 2.1
TNXA-203ENST00000507684 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
TNXA-203ENST00000507684 YTHDC1Q96MU7 727 aaKnown RBP28.19■■■□□ 2.1
TNXA-203ENST00000507684 IGF1RP08069 1367 aa28.15■■■□□ 2.1
TNXA-203ENST00000507684 TIAM1Q13009 1591 aa28.14■■■□□ 2.09
TNXA-203ENST00000507684 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
TNXA-203ENST00000507684 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
TNXA-203ENST00000507684 CARMIL1Q5VZK9 1371 aa28.04■■■□□ 2.08
TNXA-203ENST00000507684 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
TNXA-203ENST00000507684 LRRC9Q6ZRR7 1453 aa27.97■■■□□ 2.07
TNXA-203ENST00000507684 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
TNXA-203ENST00000507684 RAB3GAP2Q9H2M9 1393 aa27.92■■■□□ 2.06
TNXA-203ENST00000507684 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
TNXA-203ENST00000507684 PCF11O94913 1555 aaKnown RBP27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms