RNA–Protein interactions for RNA: ENST00000246662.8

KRT9-201, Transcript of keratin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT9, Length 2,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9-201ENST00000246662 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
KRT9-201ENST00000246662 CCDC180Q9P1Z9 1646 aa34.39■■■■□ 3.1
KRT9-201ENST00000246662 SHROOM4Q9ULL8 1493 aa33.73■■■□□ 2.99
KRT9-201ENST00000246662 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
KRT9-201ENST00000246662 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
KRT9-201ENST00000246662 DCAF1Q9Y4B6 1507 aa32.63■■■□□ 2.81
KRT9-201ENST00000246662 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
KRT9-201ENST00000246662 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
KRT9-201ENST00000246662 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
KRT9-201ENST00000246662 ABCC9O60706 1549 aa32.32■■■□□ 2.76
KRT9-201ENST00000246662 NACADO15069 1562 aa31.98■■■□□ 2.71
KRT9-201ENST00000246662 HRCP23327 699 aa31.72■■■□□ 2.67
KRT9-201ENST00000246662 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
KRT9-201ENST00000246662 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
KRT9-201ENST00000246662 PCGF6Q9BYE7 350 aa31.52■■■□□ 2.64
KRT9-201ENST00000246662 LOC105371045A0A1W2PR82 267 aa31.41■■■□□ 2.62
KRT9-201ENST00000246662 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.6
KRT9-201ENST00000246662 UNC13AQ9UPW8 1703 aa31.02■■■□□ 2.56
KRT9-201ENST00000246662 PPARGC1BQ86YN6 1023 aaKnown RBP31■■■□□ 2.55
KRT9-201ENST00000246662 TRIM26Q12899 539 aaPredicted RBP30.9■■■□□ 2.54
KRT9-201ENST00000246662 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
KRT9-201ENST00000246662 CECR2Q9BXF3 1484 aa30.79■■■□□ 2.52
KRT9-201ENST00000246662 MROH2BQ7Z745 1585 aa30.71■■■□□ 2.51
KRT9-201ENST00000246662 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
KRT9-201ENST00000246662 FAM9AQ8IZU1 332 aaPredicted RBP30.61■■■□□ 2.49
KRT9-201ENST00000246662 WIZO95785 1651 aa30.55■■■□□ 2.48
KRT9-201ENST00000246662 PABPN1Q86U42 306 aaKnown RBP eCLIP30.45■■■□□ 2.46
KRT9-201ENST00000246662 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
KRT9-201ENST00000246662 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
KRT9-201ENST00000246662 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
KRT9-201ENST00000246662 ZEB1P37275 1124 aaPredicted RBP30.29■■■□□ 2.44
KRT9-201ENST00000246662 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
KRT9-201ENST00000246662 TOP2AP11388 1531 aaKnown RBP30.08■■■□□ 2.41
KRT9-201ENST00000246662 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.38
KRT9-201ENST00000246662 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
KRT9-201ENST00000246662 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
KRT9-201ENST00000246662 PEG3Q9GZU2 1588 aa29.93■■■□□ 2.38
KRT9-201ENST00000246662 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
KRT9-201ENST00000246662 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
KRT9-201ENST00000246662 SOGA1O94964 1423 aa29.69■■■□□ 2.34
KRT9-201ENST00000246662 CEP162Q5TB80 1403 aa29.64■■■□□ 2.34
KRT9-201ENST00000246662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
KRT9-201ENST00000246662 BAZ1BQ9UIG0 1483 aaKnown RBP29.59■■■□□ 2.33
KRT9-201ENST00000246662 TNIKQ9UKE5 1360 aa29.58■■■□□ 2.33
KRT9-201ENST00000246662 EEA1Q15075 1411 aa29.56■■■□□ 2.32
KRT9-201ENST00000246662 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
KRT9-201ENST00000246662 CCER1Q8TC90 406 aaPredicted RBP29.54■■■□□ 2.32
KRT9-201ENST00000246662 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
KRT9-201ENST00000246662 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
KRT9-201ENST00000246662 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
KRT9-201ENST00000246662 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
KRT9-201ENST00000246662 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
KRT9-201ENST00000246662 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
KRT9-201ENST00000246662 SCAF1Q9H7N4 1312 aaKnown RBP29.33■■■□□ 2.29
KRT9-201ENST00000246662 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
KRT9-201ENST00000246662 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
KRT9-201ENST00000246662 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
KRT9-201ENST00000246662 KIF21BO75037 1637 aa29.18■■■□□ 2.26
KRT9-201ENST00000246662 DIEXFQ68CQ4 756 aaKnown RBP29.08■■■□□ 2.25
KRT9-201ENST00000246662 CLIP1P30622 1438 aa29.03■■■□□ 2.24
KRT9-201ENST00000246662 ACIN1Q9UKV3 1341 aaKnown RBP28.98■■■□□ 2.23
KRT9-201ENST00000246662 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
KRT9-201ENST00000246662 VPS8Q8N3P4 1428 aa28.95■■■□□ 2.23
KRT9-201ENST00000246662 NEUROD1Q13562 356 aa28.94■■■□□ 2.22
KRT9-201ENST00000246662 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
KRT9-201ENST00000246662 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
KRT9-201ENST00000246662 CFTRP13569 1480 aa28.84■■■□□ 2.21
KRT9-201ENST00000246662 ZNF316A6NFI3 1004 aaPredicted RBP28.83■■■□□ 2.21
KRT9-201ENST00000246662 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
KRT9-201ENST00000246662 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
KRT9-201ENST00000246662 PRDM2Q13029 1718 aa28.79■■■□□ 2.2
KRT9-201ENST00000246662 CENPBP07199 599 aaPredicted RBP28.74■■■□□ 2.19
KRT9-201ENST00000246662 APLP2Q06481 763 aa28.72■■■□□ 2.19
KRT9-201ENST00000246662 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
KRT9-201ENST00000246662 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
KRT9-201ENST00000246662 ERICH3Q5RHP9 1530 aa28.68■■■□□ 2.18
KRT9-201ENST00000246662 PRXQ9BXM0 1461 aa28.67■■■□□ 2.18
KRT9-201ENST00000246662 GTF3C3Q9Y5Q9 886 aa28.63■■■□□ 2.17
KRT9-201ENST00000246662 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
KRT9-201ENST00000246662 CUX1P39880 1505 aa28.58■■■□□ 2.17
KRT9-201ENST00000246662 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
KRT9-201ENST00000246662 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
KRT9-201ENST00000246662 MIER1Q8N108 512 aa28.45■■■□□ 2.14
KRT9-201ENST00000246662 KANK4Q5T7N3 995 aaPredicted RBP28.43■■■□□ 2.14
KRT9-201ENST00000246662 FANCD2Q9BXW9 1451 aa28.41■■■□□ 2.14
KRT9-201ENST00000246662 NESP48681 1621 aa28.39■■■□□ 2.14
KRT9-201ENST00000246662 DHX57Q6P158 1386 aaKnown RBP28.37■■■□□ 2.13
KRT9-201ENST00000246662 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
KRT9-201ENST00000246662 YTHDC1Q96MU7 727 aaKnown RBP28.36■■■□□ 2.13
KRT9-201ENST00000246662 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
KRT9-201ENST00000246662 RRBP1Q9P2E9 1410 aaKnown RBP28.33■■■□□ 2.13
KRT9-201ENST00000246662 ARHGAP35Q9NRY4 1499 aa28.3■■■□□ 2.12
KRT9-201ENST00000246662 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
KRT9-201ENST00000246662 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
KRT9-201ENST00000246662 CUX2O14529 1486 aa28.2■■■□□ 2.11
KRT9-201ENST00000246662 CCNB3Q8WWL7 1395 aa28.17■■■□□ 2.1
KRT9-201ENST00000246662 IGF1RP08069 1367 aa28.15■■■□□ 2.1
KRT9-201ENST00000246662 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
KRT9-201ENST00000246662 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
KRT9-201ENST00000246662 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms