RNA–Protein interactions for RNA: ENST00000540265.5

PGM1-205, Transcript of phosphoglucomutase 1, humanhuman

TSL 2 BASIC

Gene PGM1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM1-205ENST00000540265 NISCHQ9Y2I1 1504 aa40.07■■■■■ 4.01
PGM1-205ENST00000540265 SHROOM4Q9ULL8 1493 aa34.43■■■■□ 3.1
PGM1-205ENST00000540265 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
PGM1-205ENST00000540265 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
PGM1-205ENST00000540265 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
PGM1-205ENST00000540265 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
PGM1-205ENST00000540265 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
PGM1-205ENST00000540265 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
PGM1-205ENST00000540265 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
PGM1-205ENST00000540265 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
PGM1-205ENST00000540265 ABCC9O60706 1549 aa31.94■■■□□ 2.7
PGM1-205ENST00000540265 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
PGM1-205ENST00000540265 PCGF6Q9BYE7 350 aa31.78■■■□□ 2.68
PGM1-205ENST00000540265 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
PGM1-205ENST00000540265 HRCP23327 699 aa31.67■■■□□ 2.66
PGM1-205ENST00000540265 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
PGM1-205ENST00000540265 NACADO15069 1562 aa31.4■■■□□ 2.62
PGM1-205ENST00000540265 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
PGM1-205ENST00000540265 TRIM41Q8WV44 630 aa31.32■■■□□ 2.6
PGM1-205ENST00000540265 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
PGM1-205ENST00000540265 PPARGC1BQ86YN6 1023 aaKnown RBP31.23■■■□□ 2.59
PGM1-205ENST00000540265 FAM9AQ8IZU1 332 aaPredicted RBP31.22■■■□□ 2.59
PGM1-205ENST00000540265 WIZO95785 1651 aa31.07■■■□□ 2.56
PGM1-205ENST00000540265 EHMT2Q96KQ7 1210 aa31.07■■■□□ 2.56
PGM1-205ENST00000540265 TRIM26Q12899 539 aaPredicted RBP31.04■■■□□ 2.56
PGM1-205ENST00000540265 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
PGM1-205ENST00000540265 EIF4G1Q04637 1599 aaKnown RBP30.56■■■□□ 2.48
PGM1-205ENST00000540265 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
PGM1-205ENST00000540265 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
PGM1-205ENST00000540265 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
PGM1-205ENST00000540265 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
PGM1-205ENST00000540265 ABCC8Q09428 1581 aa30.43■■■□□ 2.46
PGM1-205ENST00000540265 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
PGM1-205ENST00000540265 SMARCA2P51531 1590 aa30.36■■■□□ 2.45
PGM1-205ENST00000540265 ZEB1P37275 1124 aaPredicted RBP30.23■■■□□ 2.43
PGM1-205ENST00000540265 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
PGM1-205ENST00000540265 SOGA1O94964 1423 aa30.16■■■□□ 2.42
PGM1-205ENST00000540265 RUSC2Q8N2Y8 1516 aa30.05■■■□□ 2.4
PGM1-205ENST00000540265 TTBK1Q5TCY1 1321 aaPredicted RBP30.03■■■□□ 2.4
PGM1-205ENST00000540265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
PGM1-205ENST00000540265 CEP162Q5TB80 1403 aa29.94■■■□□ 2.38
PGM1-205ENST00000540265 CSRNP3Q8WYN3 585 aa29.92■■■□□ 2.38
PGM1-205ENST00000540265 UBTFP17480 764 aaKnown RBP29.86■■■□□ 2.37
PGM1-205ENST00000540265 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
PGM1-205ENST00000540265 PEG3Q9GZU2 1588 aa29.84■■■□□ 2.37
PGM1-205ENST00000540265 WRNQ14191 1432 aaPredicted RBP eCLIP29.82■■■□□ 2.36
PGM1-205ENST00000540265 CCER1Q8TC90 406 aaPredicted RBP29.78■■■□□ 2.36
PGM1-205ENST00000540265 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
PGM1-205ENST00000540265 EEA1Q15075 1411 aa29.75■■■□□ 2.35
PGM1-205ENST00000540265 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
PGM1-205ENST00000540265 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
PGM1-205ENST00000540265 GOLGA3Q08378 1498 aa29.65■■■□□ 2.34
PGM1-205ENST00000540265 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
PGM1-205ENST00000540265 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
PGM1-205ENST00000540265 KIF21BO75037 1637 aa29.4■■■□□ 2.3
PGM1-205ENST00000540265 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
PGM1-205ENST00000540265 CLIP1P30622 1438 aa29.37■■■□□ 2.29
PGM1-205ENST00000540265 SCAF1Q9H7N4 1312 aaKnown RBP29.27■■■□□ 2.28
PGM1-205ENST00000540265 HNRNPUL2Q1KMD3 747 aaKnown RBP29.26■■■□□ 2.27
PGM1-205ENST00000540265 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
PGM1-205ENST00000540265 VPS8Q8N3P4 1428 aa29.2■■■□□ 2.27
PGM1-205ENST00000540265 DIEXFQ68CQ4 756 aaKnown RBP29.19■■■□□ 2.26
PGM1-205ENST00000540265 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
PGM1-205ENST00000540265 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
PGM1-205ENST00000540265 APLP2Q06481 763 aa29.1■■■□□ 2.25
PGM1-205ENST00000540265 CUX1P39880 1505 aa29.05■■■□□ 2.24
PGM1-205ENST00000540265 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
PGM1-205ENST00000540265 PRXQ9BXM0 1461 aa29.01■■■□□ 2.23
PGM1-205ENST00000540265 NEUROD1Q13562 356 aa28.97■■■□□ 2.23
PGM1-205ENST00000540265 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
PGM1-205ENST00000540265 CFTRP13569 1480 aa28.92■■■□□ 2.22
PGM1-205ENST00000540265 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
PGM1-205ENST00000540265 ARAP1Q96P48 1450 aa28.92■■■□□ 2.22
PGM1-205ENST00000540265 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
PGM1-205ENST00000540265 KANK4Q5T7N3 995 aaPredicted RBP28.89■■■□□ 2.22
PGM1-205ENST00000540265 KIF27Q86VH2 1401 aa28.86■■■□□ 2.21
PGM1-205ENST00000540265 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
PGM1-205ENST00000540265 CUX2O14529 1486 aa28.66■■■□□ 2.18
PGM1-205ENST00000540265 CENPBP07199 599 aaPredicted RBP28.65■■■□□ 2.18
PGM1-205ENST00000540265 GTF3C3Q9Y5Q9 886 aa28.64■■■□□ 2.18
PGM1-205ENST00000540265 IGF1RP08069 1367 aa28.63■■■□□ 2.17
PGM1-205ENST00000540265 MIER1Q8N108 512 aa28.63■■■□□ 2.17
PGM1-205ENST00000540265 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
PGM1-205ENST00000540265 YTHDC1Q96MU7 727 aaKnown RBP28.61■■■□□ 2.17
PGM1-205ENST00000540265 DHX57Q6P158 1386 aaKnown RBP28.59■■■□□ 2.17
PGM1-205ENST00000540265 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
PGM1-205ENST00000540265 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
PGM1-205ENST00000540265 ITGAEP38570 1179 aa28.53■■■□□ 2.16
PGM1-205ENST00000540265 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
PGM1-205ENST00000540265 CARMIL1Q5VZK9 1371 aa28.49■■■□□ 2.15
PGM1-205ENST00000540265 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
PGM1-205ENST00000540265 CCNB3Q8WWL7 1395 aa28.44■■■□□ 2.14
PGM1-205ENST00000540265 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
PGM1-205ENST00000540265 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
PGM1-205ENST00000540265 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
PGM1-205ENST00000540265 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
PGM1-205ENST00000540265 TIAM1Q13009 1591 aa28.3■■■□□ 2.12
PGM1-205ENST00000540265 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
PGM1-205ENST00000540265 NESP48681 1621 aa28.28■■■□□ 2.12
PGM1-205ENST00000540265 ATP1B4Q9UN42 357 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms