Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 AL592295.1-201ENST00000400984 884 ntBASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM88Q6PEY1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 OXCT2P1-201ENST00000447263 1535 ntBASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
TMEM88Q6PEY1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 THA1P-201ENST00000590384 1145 ntBASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AL133373.2-201ENST00000623187 2828 ntBASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM88Q6PEY1 AL049812.1-201ENST00000432563 2267 ntBASIC16.59■□□□□ 0.25
TMEM88Q6PEY1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM88Q6PEY1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM88Q6PEY1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms