Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00242Q5T6M2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00242Q5T6M2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 AC009237.3-201ENST00000393279 1427 ntBASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00242Q5T6M2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 BX005040.4-201ENST00000637145 1518 ntBASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00242Q5T6M2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 AC055733.4-201ENST00000638462 1354 ntBASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 AC011484.1-201ENST00000377652 1995 ntBASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00242Q5T6M2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00242Q5T6M2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
LINC00242Q5T6M2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00242Q5T6M2 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms